Miyakogusa Predicted Gene
- Lj0g3v0056199.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0056199.1 tr|G5AVB1|G5AVB1_HETGA Zinc finger protein 511
OS=Heterocephalus glaber GN=GW7_07881 PE=4
SV=1,34.4,5e-19,ZINC_FINGER_C2H2_1,Zinc finger, C2H2; SUBFAMILY NOT
NAMED,NULL; UNCHARACTERIZED,NULL; C2H2 and C2HC
,NODE_21827_length_1175_cov_67.757446.path1.1
(729 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57646 similar to UniRef100_Q84WK1 Cluster: At5g14140;... 1445 0.0
gnl|LJGI|FS321754 similar to UniRef100_Q84WK1 Cluster: At5g14140... 1019 0.0
gnl|LJGI|TC65728 similar to UniRef100_Q84WK1 Cluster: At5g14140;... 523 e-148
>gnl|LJGI|TC57646 similar to UniRef100_Q84WK1 Cluster: At5g14140; n=1; Arabidopsis
thaliana|Rep: At5g14140 - Arabidopsis thaliana
(Mouse-ear cress), partial (61%)
Length = 1288
Score = 1445 bits (729), Expect = 0.0
Identities = 729/729 (100%)
Strand = Plus / Plus
Query: 1 atgatggaggtggagaagccaaatctggaatcagggtttcccttctggaaaccgcttcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 atgatggaggtggagaagccaaatctggaatcagggtttcccttctggaaaccgcttcct 114
Query: 61 cgcatgttcccacccgactctcctttcttcgctcctggtaacctcgaacgagagcttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 cgcatgttcccacccgactctcctttcttcgctcctggtaacctcgaacgagagcttctt 174
Query: 121 gctaaacaggttgccttggaatttccagaagaaaagctagagcttgagaattggatacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 gctaaacaggttgccttggaatttccagaagaaaagctagagcttgagaattggatacaa 234
Query: 181 gaagaagctagggaagtgttttgtcccattgtcggttgtcgagcgcggttgaaatcatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 gaagaagctagggaagtgttttgtcccattgtcggttgtcgagcgcggttgaaatcatta 294
Query: 241 gaggactttgaaaatcactatagtgcaaggcatcactctgcatgctgttctgtgtgttcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gaggactttgaaaatcactatagtgcaaggcatcactctgcatgctgttctgtgtgttcc 354
Query: 301 agagtctacccgacatcgcgtttgctcagcatacatgtatctgaagagcatgattctttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 agagtctacccgacatcgcgtttgctcagcatacatgtatctgaagagcatgattctttc 414
Query: 361 tttaaggcaaaagttgcgcgtggctatgatgtgtatgaatgcttagtggaaggttgtggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tttaaggcaaaagttgcgcgtggctatgatgtgtatgaatgcttagtggaaggttgtggt 474
Query: 421 ttgaaattcaaaagctacactagtaggaagcagcatctagttgacaagcatggatttccc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ttgaaattcaaaagctacactagtaggaagcagcatctagttgacaagcatggatttccc 534
Query: 481 aagtcatttcagtttttcaagaaggctgcaccttcaaagaaagagaggctaaagactcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 aagtcatttcagtttttcaagaaggctgcaccttcaaagaaagagaggctaaagactcaa 594
Query: 541 cacaaacaagctgctcataaggaggatgcttctggaatgatggaagtggaaaatgcagcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 cacaaacaagctgctcataaggaggatgcttctggaatgatggaagtggaaaatgcagcc 654
Query: 601 atggatgaccttgtttcagcagtctctagattgaatacttcggactccactccgtcttca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 atggatgaccttgtttcagcagtctctagattgaatacttcggactccactccgtcttca 714
Query: 661 atcagcttcggccgccgccccaaaggcttgtcatttgtccctcgatctgttcagcgtgga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 atcagcttcggccgccgccccaaaggcttgtcatttgtccctcgatctgttcagcgtgga 774
Query: 721 aatagatga 729
|||||||||
Sbjct: 775 aatagatga 783
>gnl|LJGI|FS321754 similar to UniRef100_Q84WK1 Cluster: At5g14140; n=1; Arabidopsis
thaliana|Rep: At5g14140 - Arabidopsis thaliana
(Mouse-ear cress), partial (55%)
Length = 785
Score = 1019 bits (514), Expect = 0.0
Identities = 514/514 (100%)
Strand = Plus / Plus
Query: 128 aggttgccttggaatttccagaagaaaagctagagcttgagaattggatacaagaagaag 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aggttgccttggaatttccagaagaaaagctagagcttgagaattggatacaagaagaag 331
Query: 188 ctagggaagtgttttgtcccattgtcggttgtcgagcgcggttgaaatcattagaggact 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ctagggaagtgttttgtcccattgtcggttgtcgagcgcggttgaaatcattagaggact 391
Query: 248 ttgaaaatcactatagtgcaaggcatcactctgcatgctgttctgtgtgttccagagtct 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ttgaaaatcactatagtgcaaggcatcactctgcatgctgttctgtgtgttccagagtct 451
Query: 308 acccgacatcgcgtttgctcagcatacatgtatctgaagagcatgattctttctttaagg 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 acccgacatcgcgtttgctcagcatacatgtatctgaagagcatgattctttctttaagg 511
Query: 368 caaaagttgcgcgtggctatgatgtgtatgaatgcttagtggaaggttgtggtttgaaat 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 caaaagttgcgcgtggctatgatgtgtatgaatgcttagtggaaggttgtggtttgaaat 571
Query: 428 tcaaaagctacactagtaggaagcagcatctagttgacaagcatggatttcccaagtcat 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 tcaaaagctacactagtaggaagcagcatctagttgacaagcatggatttcccaagtcat 631
Query: 488 ttcagtttttcaagaaggctgcaccttcaaagaaagagaggctaaagactcaacacaaac 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 ttcagtttttcaagaaggctgcaccttcaaagaaagagaggctaaagactcaacacaaac 691
Query: 548 aagctgctcataaggaggatgcttctggaatgatggaagtggaaaatgcagccatggatg 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 aagctgctcataaggaggatgcttctggaatgatggaagtggaaaatgcagccatggatg 751
Query: 608 accttgtttcagcagtctctagattgaatacttc 641
||||||||||||||||||||||||||||||||||
Sbjct: 752 accttgtttcagcagtctctagattgaatacttc 785
Score = 262 bits (132), Expect = 3e-69
Identities = 132/132 (100%)
Strand = Plus / Plus
Query: 1 atgatggaggtggagaagccaaatctggaatcagggtttcccttctggaaaccgcttcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 atgatggaggtggagaagccaaatctggaatcagggtttcccttctggaaaccgcttcct 101
Query: 61 cgcatgttcccacccgactctcctttcttcgctcctggtaacctcgaacgagagcttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 cgcatgttcccacccgactctcctttcttcgctcctggtaacctcgaacgagagcttctt 161
Query: 121 gctaaacaggtt 132
||||||||||||
Sbjct: 162 gctaaacaggtt 173
>gnl|LJGI|TC65728 similar to UniRef100_Q84WK1 Cluster: At5g14140; n=1; Arabidopsis
thaliana|Rep: At5g14140 - Arabidopsis thaliana
(Mouse-ear cress), partial (36%)
Length = 792
Score = 523 bits (264), Expect = e-148
Identities = 267/268 (99%)
Strand = Plus / Plus
Query: 225 gcggttgaaatcattagaggactttgaaaatcactatagtgcaaggcatcactctgcatg 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcggttgaaatcattagaggactttgaaaatcactatagtgcaaggcatcactctgcatg 60
Query: 285 ctgttctgtgtgttccagagtctacccgacatcgcgtttgctcagcatacatgtatctga 344
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgttccgtgtgttccagagtctacccgacatcgcgtttgctcagcatacatgtatctga 120
Query: 345 agagcatgattctttctttaaggcaaaagttgcgcgtggctatgatgtgtatgaatgctt 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agagcatgattctttctttaaggcaaaagttgcgcgtggctatgatgtgtatgaatgctt 180
Query: 405 agtggaaggttgtggtttgaaattcaaaagctacactagtaggaagcagcatctagttga 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agtggaaggttgtggtttgaaattcaaaagctacactagtaggaagcagcatctagttga 240
Query: 465 caagcatggatttcccaagtcatttcag 492
||||||||||||||||||||||||||||
Sbjct: 241 caagcatggatttcccaagtcatttcag 268
Score = 230 bits (116), Expect = 1e-59
Identities = 116/116 (100%)
Strand = Plus / Plus
Query: 614 tttcagcagtctctagattgaatacttcggactccactccgtcttcaatcagcttcggcc 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tttcagcagtctctagattgaatacttcggactccactccgtcttcaatcagcttcggcc 322
Query: 674 gccgccccaaaggcttgtcatttgtccctcgatctgttcagcgtggaaatagatga 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gccgccccaaaggcttgtcatttgtccctcgatctgttcagcgtggaaatagatga 378