Miyakogusa Predicted Gene
- Lj0g3v0056169.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0056169.1 Non Chatacterized Hit- tr|B9RBH6|B9RBH6_RICCO
Ribonucleoside-diphosphate reductase small chain,
puta,85.11,0,Ribonuc_red_sm,Ribonucleotide reductase small subunit;
SUBFAMILY NOT NAMED,NULL; RIBONUCLEOSIDE-DIPH,CUFF.2468.1
(982 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72626 similar to UniRef100_P49730 Cluster: Ribonucleo... 1015 0.0
gnl|LJGI|TC69047 similar to UniRef100_P49730 Cluster: Ribonucleo... 975 0.0
gnl|LJGI|TC79592 similar to UniRef100_Q5YJM7 Cluster: Ribonucleo... 888 0.0
gnl|LJGI|TC75168 similar to UniRef100_P49730 Cluster: Ribonucleo... 858 0.0
gnl|LJGI|GO024211 similar to UniRef100_P49730 Cluster: Ribonucle... 196 2e-49
gnl|LJGI|FS361906 similar to UniRef100_P49730 Cluster: Ribonucle... 170 1e-41
>gnl|LJGI|TC72626 similar to UniRef100_P49730 Cluster: Ribonucleoside-diphosphate
reductase small chain; n=1; Nicotiana tabacum|Rep:
Ribonucleoside-diphosphate reductase small chain -
Nicotiana tabacum (Common tobacco), complete
Length = 1179
Score = 1015 bits (512), Expect = 0.0
Identities = 815/916 (88%)
Strand = Plus / Plus
Query: 14 cagaagagcctctccttgcacccaacccagaccgcttctgcatgttcccaatccaatacc 73
||||||||||||| ||||| || |||||||| || |||||||||||||||||||||||||
Sbjct: 75 cagaagagcctcttcttgctccaaacccagatcgattctgcatgttcccaatccaatacc 134
Query: 74 ccgaaatctggcaaatgtacaagaaagccctcgcctccttctggaccgccgaagaagtcg 133
| | || ||| ||||||||||||||||| || || |||||||| || || || || |
Sbjct: 135 cacagatttgggaaatgtacaagaaagccgaagcatcgttctggacggcggaggaggttg 194
Query: 134 acctctcccacgacctccgcgactgggactccctcaacgacggcgaacgccacttcatca 193
| || || ||| |||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 195 atctatcgtccgatctccgccactgggactccctcaccgacggcgaacgccacttcatca 254
Query: 194 cccacgtcctcgccttcttcgccgcctccgacggcatcgtcctcgaaaatctcgccggaa 253
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 255 cccacgtcctcgccttcttcgccgcctccgacgggatagtcctcgaaaatctcgccggaa 314
Query: 254 ggttcatgaaagaagtccaaatcgccgaagcacgcgccttctacggcttccagatcgcca 313
|||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||| |
Sbjct: 315 ggttcatgaaggaagtccaatccgccgaggcacgcgccttctacggcttccagatcgcga 374
Query: 314 tcgagaacatccactccgagatgtacagcctcctgttagaaacctacatcaaggactcca 373
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tcgagaacatccactccgagatgtacagcctcctgttagaaacctacatcaaggactccg 434
Query: 374 ccgagaaacaccgcctcttccacgccgtcgaaaccatcccctgcgtcgcgaagaaagccg 433
| || ||| | |||||||| |||||| |||||||||||||||||| |||||||||||
Sbjct: 435 ctgaaaaatccaacctcttccgcgccgtggaaaccatcccctgcgtcaagaagaaagccg 494
Query: 434 agtgggcgatgaaatggatcgacgcatcggattccttcgcggagcgggtggttgccttcg 493
|||||||| |||||||||||||||| | || |||||||||||||| | || || ||||
Sbjct: 495 agtgggcgttgaaatggatcgacgccaccgactccttcgcggagcgtctcgtcgctttcg 554
Query: 494 cctgcgtggaagggatcttcttctccgggagcttctgcgcgatcttctggttgaaaaaac 553
|||| ||||||||||||||||||||||||||||||||||| || |||||| |||| ||||
Sbjct: 555 cctgtgtggaagggatcttcttctccgggagcttctgcgccattttctggctgaagaaac 614
Query: 554 gcggtctcatgccggggctcacgttctccaacgagctgatctcacgcgacgaggggcttc 613
||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||
Sbjct: 615 gcggtctcatgccggggctcacgttttccaacgagctgatttcacgtgacgaggggcttc 674
Query: 614 actgcgatttcgcgtgcttgttgtattctcttctggagaagaagcttagcgaggagcgcg 673
||||||||||||||||||||||||| || || ||| || ||||||||||||||||||||
Sbjct: 675 actgcgatttcgcgtgcttgttgtactcgctgctgaggacgaagcttagcgaggagcgcg 734
Query: 674 tgaaggggattgtgcgtgatgcggtggagattgagagggagtttgtgtgcgacgcgctgc 733
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 735 tgaaggggattgtgcgtgacgcagtggagattgagagggagtttgtgtgcgacgcgctgc 794
Query: 734 cgtgtgcgttgttggggatgaatggggatcagatgagtcagtatattgagtttgttgcgg 793
||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 795 cgtgtgcgttggtggggatgaatggggatttgatgagtcagtatattgagtttgttgcgg 854
Query: 794 attattggcttgagaagcttgggtgtgggaaagtgtataatgtggtgaacccgtttcctt 853
|| | | | | ||||||||||||||| |||||| |||| ||| |||||| ||
Sbjct: 855 atcggttgttgggtgcgcttgggtgtgggaaggtgtatggtgtgcagaatccgtttgatt 914
Query: 854 ggatggagttgatttcgttgaaggggaaaactaacttctttgagaagcgcgttggagagt 913
|||||||||||||||||||| ||||||| || || |||||||||||||||||||| ||||
Sbjct: 915 ggatggagttgatttcgttgcaggggaagaccaatttctttgagaagcgcgttggggagt 974
Query: 914 accagattgcttctgt 929
| |||| ||||||||
Sbjct: 975 atcagaaggcttctgt 990
>gnl|LJGI|TC69047 similar to UniRef100_P49730 Cluster: Ribonucleoside-diphosphate
reductase small chain; n=1; Nicotiana tabacum|Rep:
Ribonucleoside-diphosphate reductase small chain -
Nicotiana tabacum (Common tobacco), partial (95%)
Length = 1157
Score = 975 bits (492), Expect = 0.0
Identities = 810/916 (88%)
Strand = Plus / Plus
Query: 14 cagaagagcctctccttgcacccaacccagaccgcttctgcatgttcccaatccaatacc 73
||||||||||||| || || || ||||||||||| |||||||||||||||||||||||||
Sbjct: 66 cagaagagcctcttctcgctccaaacccagaccgattctgcatgttcccaatccaatacc 125
Query: 74 ccgaaatctggcaaatgtacaagaaagccctcgcctccttctggaccgccgaagaagtcg 133
| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 126 cacggatctgggaaatgtacaagaaagccgaagcctccttctggaccgccgaagaagtcg 185
Query: 134 acctctcccacgacctccgcgactgggactccctcaacgacggcgaacgccacttcatca 193
| ||||| ||| |||||| ||||||||||||||| ||||||||||||| ||||||||
Sbjct: 186 atctctcatccgatctccgccactgggactccctcacagacggcgaacgccgcttcatca 245
Query: 194 cccacgtcctcgccttcttcgccgcctccgacggcatcgtcctcgaaaatctcgccggaa 253
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 246 cccacgtcctcgccttcttcgccgcctccgacgggatagtcctcgaaaatctcgccggaa 305
Query: 254 ggttcatgaaagaagtccaaatcgccgaagcacgcgccttctacggcttccagatcgcca 313
|||||||||||||||||||| |||||| |||||||||||||| || |||||||||||||
Sbjct: 306 ggttcatgaaagaagtccaatccgccgaggcacgcgccttctatgggttccagatcgcca 365
Query: 314 tcgagaacatccactccgagatgtacagcctcctgttagaaacctacatcaaggactcca 373
|||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 366 tcgaaaacatccactccgagatgtacagcctcctattggaaacctacatcaaggactccg 425
Query: 374 ccgagaaacaccgcctcttccacgccgtcgaaaccatcccctgcgtcgcgaagaaagccg 433
|||||||| | |||||||| ||||||||| ||||||||||||||| ||||||||| |
Sbjct: 426 ccgagaaatccaacctcttccgcgccgtcgacaccatcccctgcgtcaagaagaaagcgg 485
Query: 434 agtgggcgatgaaatggatcgacgcatcggattccttcgcggagcgggtggttgccttcg 493
| |||| | |||||||||||||||| |||| |||||||||||||| | || || || |
Sbjct: 486 actgggtgttgaaatggatcgacgcgacggactccttcgcggagcgcctcgtcgcgtttg 545
Query: 494 cctgcgtggaagggatcttcttctccgggagcttctgcgcgatcttctggttgaaaaaac 553
| ||||||||||||||||||||||||||||||||||| ||||| |||||| |||| ||||
Sbjct: 546 cgtgcgtggaagggatcttcttctccgggagcttctgtgcgattttctggctgaagaaac 605
Query: 554 gcggtctcatgccggggctcacgttctccaacgagctgatctcacgcgacgaggggcttc 613
||||||||||||||||||||||||| ||||||||| |||| ||||| |||||||||||||
Sbjct: 606 gcggtctcatgccggggctcacgttttccaacgagttgatttcacgtgacgaggggcttc 665
Query: 614 actgcgatttcgcgtgcttgttgtattctcttctggagaagaagcttagcgaggagcgcg 673
|||| ||||| || || |||||||| || | ||| || |||||||||||||||||| |
Sbjct: 666 actgtgattttgcttgtttgttgtactcgttgctgaggacgaagcttagcgaggagcgtg 725
Query: 674 tgaaggggattgtgcgtgatgcggtggagattgagagggagtttgtgtgcgacgcgctgc 733
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 tgaaggggattgtgtgtgatgcggtggagattgagagggagtttgtgtgcgacgcgctgc 785
Query: 734 cgtgtgcgttgttggggatgaatggggatcagatgagtcagtatattgagtttgttgcgg 793
|||| |||| ||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 786 cgtgccggttggtggggatgaatggggatttgatgagtcagtatattgagtttgtggcgg 845
Query: 794 attattggcttgagaagcttgggtgtgggaaagtgtataatgtggtgaacccgtttcctt 853
|| | | | | |||||||||||||||| |||||| |||| ||| |||||| ||
Sbjct: 846 atcggttgttgggtgagcttgggtgtgggaaggtgtatggtgtgcagaatccgtttgatt 905
Query: 854 ggatggagttgatttcgttgaaggggaaaactaacttctttgagaagcgcgttggagagt 913
|||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 906 ggatggagatgatttcgttgcaggggaagactaacttctttgagaagcgcgttggagagt 965
Query: 914 accagattgcttctgt 929
| |||| ||||||||
Sbjct: 966 atcagaaggcttctgt 981
>gnl|LJGI|TC79592 similar to UniRef100_Q5YJM7 Cluster: Ribonucleoside-diphosphate
reductase R2; n=1; Hyacinthus orientalis|Rep:
Ribonucleoside-diphosphate reductase R2 - Hyacinthus
orientalis (Common hyacinth), partial (75%)
Length = 530
Score = 888 bits (448), Expect = 0.0
Identities = 455/456 (99%), Gaps = 1/456 (0%)
Strand = Plus / Plus
Query: 1 atgcctgtaatggcagaagagcctctccttgcacccaacccagaccgcttctgcatgttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 atgcctgtaatggcagaagagcctctccttgcacccaacccagaccgcttctgcatgttc 134
Query: 61 ccaatccaataccccgaaatctggcaaatgtacaagaaagccctcgcctccttctggacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 ccaatccaataccccgaaatctggcaaatgtacaagaaagccctcgcctccttctggacc 194
Query: 121 gccgaagaagtcgacctctcccacgacctccgcgactgggactccctcaacgacggcgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 gccgaagaagtcgacctctcccacgacctccgcgactgggactccctcaacgacggcgaa 254
Query: 181 cgccacttcatcacccacgtcctcgccttcttcgccgcc-tccgacggcatcgtcctcga 239
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 255 cgccacttcatcacccacgtcctcgccttcttcgccgccctccgacggcatcgtcctcga 314
Query: 240 aaatctcgccggaaggttcatgaaagaagtccaaatcgccgaagcacgcgccttctacgg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 aaatctcgccggaaggttcatgaaagaagtccaaatcgccgaagcacgcgccttctacgg 374
Query: 300 cttccagatcgccatcgagaacatccactccgagatgtacagcctcctgttagaaaccta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 cttccagatcgccatcgagaacatccactccgagatgtacagcctcctgttagaaaccta 434
Query: 360 catcaaggactccaccgagaaacaccgcctcttccacgccgtcgaaaccatcccctgcgt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 catcaaggactccaccgagaaacaccgcctcttccacgccgtcgaaaccatcccctgcgt 494
Query: 420 cgcgaagaaagccgagtgggcgatgaaatggatcga 455
||||||||||||||||||||||||||||||||||||
Sbjct: 495 cgcgaagaaagccgagtgggcgatgaaatggatcga 530
>gnl|LJGI|TC75168 similar to UniRef100_P49730 Cluster: Ribonucleoside-diphosphate
reductase small chain; n=1; Nicotiana tabacum|Rep:
Ribonucleoside-diphosphate reductase small chain -
Nicotiana tabacum (Common tobacco), partial (40%)
Length = 624
Score = 858 bits (433), Expect = 0.0
Identities = 455/460 (98%), Gaps = 2/460 (0%)
Strand = Plus / Plus
Query: 525 cttctgcgcgatcttctggttgaaaaaacgcggtctcatgccggggctcacgttctccaa 584
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 1 cttctgcgcgatcttctggttgaaaaaccgcggtctcatgccggggctcacgttctccna 60
Query: 585 cgagctgatctcacgcgacgaggggcttcactgcgatttcgcgtgcttgttgtattctct 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgagctgatctcacgcgacgaggggcttcactgcgatttcgcgtgcttgttgtattctct 120
Query: 645 tctggagaagaagcttagcgaggagcgcgtgaaggggattgtgcgtgatgcggtggagat 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tctggagaagaagcttagcgaggagcgcgtgaaggggattgtgcgtgatgcggtggagat 180
Query: 705 tgagagggagtttgtgtgcgacgcgctgccgtgtgcgttgttggggatgaatggggatca 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgagagggagtttgtgtgcgacgcgctgccgtgtgcgttgttggggatgaatggggatca 240
Query: 765 gatgagtcagtata-ttgagtttgttgcggatta-ttggcttgagaagcttgggtgtggg 822
|||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 241 gatgagtcagtatacttgagtttgttgcggattacttggtttgagaagcttgggtgtggg 300
Query: 823 aaagtgtataatgtggtgaacccgtttccttggatggagttgatttcgttgaaggggaaa 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaagtgtataatgtggtgaacccgtttccttggatggagttgatttcgttgaaggggaaa 360
Query: 883 actaacttctttgagaagcgcgttggagagtaccagattgcttctgtcatgaatggtgat 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 actaacttctttgagaagcgcgttggagagtaccagattgcttctgtcatgaatggtgat 420
Query: 943 ggtgatgccagagtcttcaacatggatgaggagttttgat 982
||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggtgatgccagagtcttcaacatggatgaggagttttgat 460
>gnl|LJGI|GO024211 similar to UniRef100_P49730 Cluster: Ribonucleoside-diphosphate
reductase small chain; n=1; Nicotiana tabacum|Rep:
Ribonucleoside-diphosphate reductase small chain -
Nicotiana tabacum (Common tobacco), partial (29%)
Length = 678
Score = 196 bits (99), Expect = 2e-49
Identities = 189/219 (86%)
Strand = Plus / Plus
Query: 711 ggagtttgtgtgcgacgcgctgccgtgtgcgttgttggggatgaatggggatcagatgag 770
|||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 256 ggagtttgtgtgcgacgcgctgccgtgtgcgttggtggggatgaatggggatttgatgag 315
Query: 771 tcagtatattgagtttgttgcggattattggcttgagaagcttgggtgtgggaaagtgta 830
||||||||||||||||||||||||| | | | | |||||| |||||||| |||||
Sbjct: 316 tcagtatattgagtttgttgcggatcggttgttgggtgcgcttggatgtgggaaggtgta 375
Query: 831 taatgtggtgaacccgtttccttggatggagttgatttcgttgaaggggaaaactaactt 890
| |||| ||| |||||| |||||||||||||||||||||| ||||||| || || ||
Sbjct: 376 tggtgtgcagaatccgtttgattggatggagttgatttcgttgcaggggaagaccaattt 435
Query: 891 ctttgagaagcgcgttggagagtaccagattgcttctgt 929
|||||||||||||||||| ||||| |||| ||||||||
Sbjct: 436 ctttgagaagcgcgttggggagtatcagaaggcttctgt 474
>gnl|LJGI|FS361906 similar to UniRef100_P49730 Cluster: Ribonucleoside-diphosphate
reductase small chain; n=1; Nicotiana tabacum|Rep:
Ribonucleoside-diphosphate reductase small chain -
Nicotiana tabacum (Common tobacco), partial (39%)
Length = 768
Score = 170 bits (86), Expect = 1e-41
Identities = 287/354 (81%)
Strand = Plus / Plus
Query: 396 cgccgtcgaaaccatcccctgcgtcgcgaagaaagccgagtgggcgatgaaatggatcga 455
||||||||| ||||||||||||||||| ||||| || ||||||||| ||||||||||| |
Sbjct: 240 cgccgtcgagaccatcccctgcgtcgccaagaaggcagagtgggcgctgaaatggatcaa 299
Query: 456 cgcatcggattccttcgcggagcgggtggttgccttcgcctgcgtggaagggatcttctt 515
| | || |||||||| || || | | || || || || ||| ||||||||||||||||
Sbjct: 300 ctcctccgattcctttgcagaatgcttcgtcgcgtttgcgtgcatggaagggatcttctt 359
Query: 516 ctccgggagcttctgcgcgatcttctggttgaaaaaacgcggtctcatgccggggctcac 575
||| || ||||||||||| |||| || | | || || ||||| ||||||||| || ||||
Sbjct: 360 ctctggtagcttctgcgctatctactagctcaagaagcgcggcctcatgccgaggatcac 419
Query: 576 gttctccaacgagctgatctcacgcgacgaggggcttcactgcgatttcgcgtgcttgtt 635
| ||| |||||||| |||| | || ||||| || |||||||| ||||||||| | ||
Sbjct: 420 ttactctaacgagctcatcttgtgtgatgagggcctccactgcgacttcgcgtgcctctt 479
Query: 636 gtattctcttctggagaagaagcttagcgaggagcgcgtgaaggggattgtgcgtgatgc 695
||| || ||||| ||| |||||| |||||||||| || |||| ||| ||| || | ||
Sbjct: 480 gtactcccttctcaagacgaagctcagcgaggagcatgtcaaggagatagtgtgttacgc 539
Query: 696 ggtggagattgagagggagtttgtgtgcgacgcgctgccgtgtgcgttgttggg 749
|||||||| |||||||||||||||||||| ||||| || ||||||||| ||||
Sbjct: 540 agtggagatcgagagggagtttgtgtgcgatgcgcttccatgtgcgttggtggg 593