Miyakogusa Predicted Gene

Lj0g3v0056049.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0056049.1 Non Chatacterized Hit- tr|A5BJ29|A5BJ29_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,25.08,1e-17,PGR3 (PROTON GRADIENT REGULATION 3),NULL; FAMILY NOT
NAMED,NULL; PPR: pentatricopeptide repeat domai,CUFF.2460.1
         (1445 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71210 weakly similar to UniRef100_A7NSL4 Cluster: Chr...    52   1e-05

>gnl|LJGI|TC71210 weakly similar to UniRef100_A7NSL4 Cluster: Chromosome chr18
           scaffold_1, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (24%)
          Length = 588

 Score = 52.0 bits (26), Expect = 1e-05
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 882 aatgcctgagaggaatgttgtgacttggaatggtatgatttgtggg 927
           |||||||||||| ||||| |||||||||||||  |||||| |||||
Sbjct: 345 aatgcctgagagaaatgtcgtgacttggaatgccatgattagtggg 390