Miyakogusa Predicted Gene

Lj0g3v0055519.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0055519.1 tr|Q6ZND7|Q6ZND7_HUMAN cDNA FLJ16192 fis, clone
BRTHA2017364, weakly similar to ATP-DEPENDENT RNA
HE,85.54,0,HELICASE_ATP_BIND_1,Helicase, superfamily 1/2, ATP-binding
domain; HELICASE_CTER,Helicase,
C-termina,NODE_38073_length_1836_cov_59.866013.path1.1
         (1275 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76431 similar to UniRef100_A7NW17 Cluster: Chromosome...   513   e-145
gnl|LJGI|TC69235 similar to UniRef100_A0D4N6 Cluster: Chromosome...   391   e-108

>gnl|LJGI|TC76431 similar to UniRef100_A7NW17 Cluster: Chromosome chr5 scaffold_2,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr5 scaffold_2, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (13%)
          Length = 647

 Score =  513 bits (259), Expect = e-145
 Identities = 262/263 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1013 cccagtttatggtttgcactgacagagcatcacggggaattgacttcgcggaagtgaatc 1072
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    cccagtttatggtttgcactgacagagcatcacggggaattgacttcgcggaagtgaatc 60

                                                                        
Query: 1073 atgtcatactttttgacttcccacgtgatccgagtgaatatgtgcggcgtgttggaagaa 1132
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   atgtcatactttttgacttcccacgtgatccgagtgaatatgtgcggcgtgttggaagaa 120

                                                                        
Query: 1133 cagccagaggtgctaggggacagggcaaggcatttatctttgtggttggcaagcaagtat 1192
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  cagccagaggtgctaggggacagggcaaggcatttatctttgtggttggcaagcaagtat 180

                                                                        
Query: 1193 cccttgcacgcaaaataatggaaagaaatcggaagggtcaccccctacatgatgtacctt 1252
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  cccttgcacgcaaaatcatggaaagaaatcggaagggtcaccccctacatgatgtacctt 240

                                   
Query: 1253 cggcttttgagctgatgagatag 1275
            |||||||||||||||||||||||
Sbjct: 241  cggcttttgagctgatgagatag 263


>gnl|LJGI|TC69235 similar to UniRef100_A0D4N6 Cluster: Chromosome undetermined
           scaffold_38, whole genome shotgun sequence; n=1;
           Paramecium tetraurelia|Rep: Chromosome undetermined
           scaffold_38, whole genome shotgun sequence - Paramecium
           tetraurelia, partial (6%)
          Length = 794

 Score =  391 bits (197), Expect = e-108
 Identities = 197/197 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggataacagaaagccatcaatgccagacaacaactttttcagtgtcaaatccttcaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 atggataacagaaagccatcaatgccagacaacaactttttcagtgtcaaatccttcaag 657

                                                                       
Query: 61  gatataggctgctctgacaatgtcattcaatccctccagaaccagtcttttactcgccct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 gatataggctgctctgacaatgtcattcaatccctccagaaccagtcttttactcgccct 717

                                                                       
Query: 121 tcccatgtacaggcgatggcatttggtcctgttattgctggaaagacttgtgtcatatct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 tcccatgtacaggcgatggcatttggtcctgttattgctggaaagacttgtgtcatatct 777

                            
Query: 181 gatcaaagcggttctgg 197
           |||||||||||||||||
Sbjct: 778 gatcaaagcggttctgg 794