Miyakogusa Predicted Gene
- Lj0g3v0055339.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0055339.1 Non Chatacterized Hit- tr|Q01DN1|Q01DN1_OSTTA
Putative 50S ribosomal protein L3 (ISS) OS=Ostreococcu,50,0.0002,50S
RIBOSOMAL PROTEIN L3,Ribosomal protein L3, bacterial/organelle-type;
Ribosomal_L3,Ribosomal
prot,NODE_17083_length_867_cov_472.347168.path1.1
(663 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62800 similar to UniRef100_Q9SKX4 Cluster: 50S riboso... 1314 0.0
gnl|LJGI|TC75763 homologue to UniRef100_O80360 Cluster: 50S ribo... 628 e-179
>gnl|LJGI|TC62800 similar to UniRef100_Q9SKX4 Cluster: 50S ribosomal protein L3-1,
chloroplast precursor; n=2; Arabidopsis thaliana|Rep:
50S ribosomal protein L3-1, chloroplast precursor -
Arabidopsis thaliana (Mouse-ear cress), partial (83%)
Length = 1101
Score = 1314 bits (663), Expect = 0.0
Identities = 663/663 (100%)
Strand = Plus / Plus
Query: 1 atggaagcaggtgtcggagtcatgggaaccaagttgggaatgatgagctatttcgaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 atggaagcaggtgtcggagtcatgggaaccaagttgggaatgatgagctatttcgaagaa 353
Query: 61 aacggtgtcgttgttccggtcactgtcgtcggtttcaaagaaggtaacatcgtcacgcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 aacggtgtcgttgttccggtcactgtcgtcggtttcaaagaaggtaacatcgtcacgcaa 413
Query: 121 ctcaaaaccgaagccactgatggctacgacgctgttcaagttggttaccagaggatccgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 ctcaaaaccgaagccactgatggctacgacgctgttcaagttggttaccagaggatccgg 473
Query: 181 gaccgcaagctcaccaaacctgagttgggtcatcttgagaaggttggtgctatccccatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 gaccgcaagctcaccaaacctgagttgggtcatcttgagaaggttggtgctatccccatg 533
Query: 241 cgccatcttcaggagtttcgccttcaatcgcttgagggtttcgacctcaaccagcgcctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 cgccatcttcaggagtttcgccttcaatcgcttgagggtttcgacctcaaccagcgcctt 593
Query: 301 gttttcgatgaactgttcaaggagggtgatcttgttgatgtctctggcaccaccattggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 gttttcgatgaactgttcaaggagggtgatcttgttgatgtctctggcaccaccattggc 653
Query: 361 aagggtttccaaggtggtatcaagcgatggaacttcaaaaggggtccaatgagccatggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 aagggtttccaaggtggtatcaagcgatggaacttcaaaaggggtccaatgagccatggt 713
Query: 421 tctaagagtcatagacaactgggatcaatcggcgccggaactacacctggtcgtgtatac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 tctaagagtcatagacaactgggatcaatcggcgccggaactacacctggtcgtgtatac 773
Query: 481 cctggaaagaagatgcccggtaggatgggtggaaccaagaggaagataagaaagcttaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 cctggaaagaagatgcccggtaggatgggtggaaccaagaggaagataagaaagcttaaa 833
Query: 541 attgtcaaaattgataaagatctgaatgtggtaatgatcaaaggtgctcttcctggtaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 attgtcaaaattgataaagatctgaatgtggtaatgatcaaaggtgctcttcctggtaag 893
Query: 601 ccagggaatcttctgcggataactccagccaagattgtagggaagaacattccaaagaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 ccagggaatcttctgcggataactccagccaagattgtagggaagaacattccaaagaat 953
Query: 661 tag 663
|||
Sbjct: 954 tag 956
>gnl|LJGI|TC75763 homologue to UniRef100_O80360 Cluster: 50S ribosomal protein L3,
chloroplast precursor; n=1; Nicotiana tabacum|Rep: 50S
ribosomal protein L3, chloroplast precursor - Nicotiana
tabacum (Common tobacco), partial (41%)
Length = 515
Score = 628 bits (317), Expect = e-179
Identities = 323/325 (99%)
Strand = Plus / Plus
Query: 339 tgtctctggcaccaccattggcaagggtttccaaggtggtatcaagcgatggaacttcaa 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtctctggcaccaccattggcaagggtttccaaggtggtatcaagcgatggaacttcaa 60
Query: 399 aaggggtccaatgagccatggttctaagagtcatagacaactgggatcaatcggcgccgg 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaggggtccaatgagccatggttctaagagtcatagacaactgggatcaatcggcgccgg 120
Query: 459 aactacacctggtcgtgtataccctggaaagaagatgcccggtaggatgggtggaaccaa 518
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 121 aactacacctggtcgtgtataccctggaaagaagatgcccggtaggatgggtggaaccca 180
Query: 519 gaggaagataagaaagcttaaaattgtcaaaattgataaagatctgaatgtggtaatgat 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaggaagataagaaagcttaaaattgtcaaaattgataaagatctgaatgtggtaatgat 240
Query: 579 caaaggtgctcttcctggtaagccagggaatcttctgcggataactccagccaagattgt 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caaaggtgctcttcctggtaagccagggaatcttctgcggataactccagccaagattgt 300
Query: 639 agggaagaacattccaaagaattag 663
||||||||||||||| |||||||||
Sbjct: 301 agggaagaacattcccaagaattag 325