Miyakogusa Predicted Gene
- Lj0g3v0055009.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0055009.1 tr|G7K792|G7K792_MEDTR PRA1 family protein B1
OS=Medicago truncatula GN=MTR_5g083490 PE=4 SV=1,82.76,0,seg,NULL;
PRA1,Prenylated rab acceptor PRA1; PRENYLATED RAB ACCEPTOR
1-RELATED,NULL,NODE_37631_length_2481_cov_112.309151.path2.1
(643 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73607 weakly similar to UniRef100_A7QFF5 Cluster: Chr... 1267 0.0
gnl|LJGI|TC71951 similar to UniRef100_A7QFF5 Cluster: Chromosome... 62 5e-09
>gnl|LJGI|TC73607 weakly similar to UniRef100_A7QFF5 Cluster: Chromosome chr8
scaffold_88, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_88, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (84%)
Length = 1130
Score = 1267 bits (639), Expect = 0.0
Identities = 642/643 (99%)
Strand = Plus / Plus
Query: 1 atgtcatccccaccgacactccccgtttccacctcccaatccaacaacaacgccgcacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 atgtcatccccaccgacactccccgtttccacctcccaatccaacaacaacgccgcacaa 193
Query: 61 tcccaacctccgatcgcaaccccagccttccgcaacttcatcactcgcgtctccaccacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 tcccaacctccgatcgcaaccccagccttccgcaacttcatcactcgcgtctccaccacc 253
Query: 121 ctccgccaaggcttctcctaccgccgcccgtggtcggagctcgttgaccgctcctccttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ctccgccaaggcttctcctaccgccgcccgtggtcggagctcgttgaccgctcctccttg 313
Query: 181 tcacggcctgacaccctcgccgaagcgtactctcggatccgcaagaatttctcatacttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tcacggcctgacaccctcgccgaagcgtactctcggatccgcaagaatttctcatacttc 373
Query: 241 cgtgtcaactacctcaccctcatcgccatcgcgctcgcggtgtcgctcgctacgcatccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 cgtgtcaactacctcaccctcatcgccatcgcgctcgcggtgtcgctcgctacgcatccg 433
Query: 301 ttctcgctgcttgtcctcttcggcctcctcgcgtcgtggtcgttcttctacctcttccgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ttctcgctgcttgtcctcttcggcctcctcgcgtcgtggtcgttcttctacctcttccgc 493
Query: 361 cctgcagatcaacccgtcgtcctcttcggccgcacgttcgcagatcgcgaaaccctaggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 cctgcagatcaacccgtcgtcctcttcggccgcacgttcgcagatcgcgaaaccctaggg 553
Query: 421 atcctcgccttgctcacaatcttcgttgttttcctcaccaacgttggatcgctcttgatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 atcctcgccttgctcacaatcttcgttgttttcctcaccaacgttggatcgctcttgatc 613
Query: 481 tccactctcatggttggcttggccatcgtctgtgcgcacggcgcgttccgcgtcccggag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 tccactctcatggttggcttggccatcgtctgtgcgcacggcgcgttccgcgtcccggag 673
Query: 541 gatctcttccttgatgaacaagagccgatgaacactggattcctctcgttcctcggcggt 600
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 gatctcttccttgatgaaccagagccgatgaacactggattcctctcgttcctcggcggt 733
Query: 601 gctgctgcttccgctgccgctccagcagtcgcgcgcgtttgaa 643
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 gctgctgcttccgctgccgctccagcagtcgcgcgcgtttgaa 776
>gnl|LJGI|TC71951 similar to UniRef100_A7QFF5 Cluster: Chromosome chr8 scaffold_88,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_88, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (74%)
Length = 999
Score = 61.9 bits (31), Expect = 5e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 520 ggcgcgttccgcgtcccggaggatctcttccttgatgaacaagagcc 566
||||| ||||||||||| |||||||||||||||||||| || |||||
Sbjct: 575 ggcgcattccgcgtccctgaggatctcttccttgatgagcaggagcc 621
Score = 54.0 bits (27), Expect = 1e-06
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 321 cggcctcctcgcgtcgtggtcgttcttctacctcttccgccctgcagatcaacccgtcgt 380
|||||| ||||| || ||| | ||| ||||||||||||||||||| |||| || ||||
Sbjct: 376 cggccttctcgcttcctggacattcctctacctcttccgccctgcggatcgccctctcgt 435
Query: 381 cctcttcggccgcac 395
||||||||||||||
Sbjct: 436 tctcttcggccgcac 450