Miyakogusa Predicted Gene

Lj0g3v0054489.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0054489.1 tr|B9NYQ5|B9NYQ5_PROMR NAD(P)H-quinone
oxidoreductase subunit N OS=Prochlorococcus marinus str. MIT
,39.29,8e-19,NdhN,NAD(P)H-quinone oxidoreductase, subunit
N,CUFF.2415.1
         (666 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58232 homologue to UniRef100_A7NXY2 Cluster: Chromoso...  1320   0.0  
gnl|LJGI|AV774838 homologue to UniRef100_A7NXY2 Cluster: Chromos...   222   2e-57

>gnl|LJGI|TC58232 homologue to UniRef100_A7NXY2 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (75%)
          Length = 1005

 Score = 1320 bits (666), Expect = 0.0
 Identities = 666/666 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcagcagcaaccagcttgggttatggaggaccaacatgcttccatgtcacaaagaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86  atgtcagcagcaaccagcttgggttatggaggaccaacatgcttccatgtcacaaagaga 145

                                                                       
Query: 61  cagcaacaaacaaggaacaacaccattgggatgatgactggttggggaggaagaagacat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 cagcaacaaacaaggaacaacaccattgggatgatgactggttggggaggaagaagacat 205

                                                                       
Query: 121 tatgagacaagcaaaaaggatgttgtaggagtggtaagatgcagtggagttgggttagga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 tatgagacaagcaaaaaggatgttgtaggagtggtaagatgcagtggagttgggttagga 265

                                                                       
Query: 181 gacttcatagggggagacttgttgaaacctgatcttggacgttggctttcagatgttgaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gacttcatagggggagacttgttgaaacctgatcttggacgttggctttcagatgttgaa 325

                                                                       
Query: 241 gagcacaaagcacttgcaatttactctcctcatgagggaggctatgaaggccgctacttg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gagcacaaagcacttgcaatttactctcctcatgagggaggctatgaaggccgctacttg 385

                                                                       
Query: 301 tctcgtctcaggcgccaaggttactattttctagacctttcagctcgtggtcttggtgat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tctcgtctcaggcgccaaggttactattttctagacctttcagctcgtggtcttggtgat 445

                                                                       
Query: 361 cctgaaaccacactcaccaagattcaccctgtttgccctcctcatgttggcaagcagcca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 cctgaaaccacactcaccaagattcaccctgtttgccctcctcatgttggcaagcagcca 505

                                                                       
Query: 421 atagcaagatggtatttcccaccagaagttgattacagacttgaagcattgccaccaaat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 atagcaagatggtatttcccaccagaagttgattacagacttgaagcattgccaccaaat 565

                                                                       
Query: 481 gcaaaaggactggtggtgtgtataattgaagccaaggttctatctaaagcagaactgcag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gcaaaaggactggtggtgtgtataattgaagccaaggttctatctaaagcagaactgcag 625

                                                                       
Query: 541 ttccttgctctgcttcctacccttaggcctaatgtgagggtcattgctgaatgtggaaac 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ttccttgctctgcttcctacccttaggcctaatgtgagggtcattgctgaatgtggaaac 685

                                                                       
Query: 601 tggagaaagtttatgtggaagccactgaaagaaattgcaggactaacagccataacggaa 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tggagaaagtttatgtggaagccactgaaagaaattgcaggactaacagccataacggaa 745

                 
Query: 661 ggttga 666
           ||||||
Sbjct: 746 ggttga 751


>gnl|LJGI|AV774838 homologue to UniRef100_A7NXY2 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (15%)
          Length = 439

 Score =  222 bits (112), Expect = 2e-57
 Identities = 115/116 (99%)
 Strand = Plus / Minus

                                                                       
Query: 551 tgcttcctacccttaggcctaatgtgagggtcattgctgaatgtggaaactggagaaagt 610
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 439 tgcttcctacccttaggcctaatgtgagggtcactgctgaatgtggaaactggagaaagt 380

                                                                   
Query: 611 ttatgtggaagccactgaaagaaattgcaggactaacagccataacggaaggttga 666
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ttatgtggaagccactgaaagaaattgcaggactaacagccataacggaaggttga 324