Miyakogusa Predicted Gene
- Lj0g3v0054479.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0054479.1 Non Chatacterized Hit- tr|D8U478|D8U478_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,41.27,1e-18,seg,NULL; Ycf54,Uncharacterised protein family
Ycf54,CUFF.2408.1
(714 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68429 similar to UniRef100_Q6NLE1 Cluster: At5g58250;... 1221 0.0
gnl|LJGI|TC61472 similar to UniRef100_Q6NLE1 Cluster: At5g58250;... 1158 0.0
gnl|LJGI|TC64827 similar to UniRef100_Q6NLE1 Cluster: At5g58250;... 1128 0.0
gnl|LJGI|AV768144 weakly similar to UniRef100_A7NXY0 Cluster: Ch... 155 5e-37
>gnl|LJGI|TC68429 similar to UniRef100_Q6NLE1 Cluster: At5g58250; n=1; Arabidopsis
thaliana|Rep: At5g58250 - Arabidopsis thaliana
(Mouse-ear cress), partial (61%)
Length = 1005
Score = 1221 bits (616), Expect = 0.0
Identities = 657/674 (97%), Gaps = 15/674 (2%)
Strand = Plus / Plus
Query: 41 ctgcaatggcagctcagagccaagctcaacaccccaccactcttgcctctgtcaatgcac 100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ctgcaatggcagctcagagccaagctcaacaccccaccactcttgcctctgtcaatgcac 61
Query: 101 tcacaggagttaaaaggcacagtctttcttataggactcactctttgcctatgaatttgg 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tcacaggagttaaaaggcacagtctttcttataggactcactctttgcctatgaatttgg 121
Query: 161 tctcccccaccaatcaaaatgtcaccttgttctcttccttcaaggaaccaacacctgctg 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tctcccccaccaatcaaaatgtcaccttgttctcttccttcaaggaaccaacacctgctg 181
Query: 221 ctgctccctttaccacagctgttgcagctgttgattctgacaacctcagttcttctgatc 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ctgctccctttaccacagctgttgcagctgttgattctgacaacctcagttcttctgatc 241
Query: 281 ctgccacaaagaaagaagccaacaagtattactttgttattgcgaatgcaaaatttatgc 340
|||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ctgcca---------------acaagtattactttgttattgcgaatgcaaaatttatgc 286
Query: 341 tggatgaggaggagcatttcagagaagtcttgtttgaaaggcttcgtctctttgaagagc 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tggatgaggaggagcatttcagagaagtcttgtttgaaaggcttcgtctctttgaagagc 346
Query: 401 gtaaaatggaacaggatttctggcttgtcattgaacctaagttcttggatagattccctg 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gtaaaatggaacaggatttctggcttgtcattgaacctaagttcttggatagattccctg 406
Query: 461 gcattaccaagagattagggagacctgctgtggctcttgtgtcaaccaatggtccctgga 520
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 407 gtattaccaagagattagggagacctgctgtggcccttgtgtcaaccaatggtccctgga 466
Query: 521 tcacatacatgaagttaaggttagaccgagttttatcagaaagttttgaggctgagagca 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 tcacatacatgaagttaaggttagaccgagttttatcagaaagttttgaggctgagagca 526
Query: 581 tagaagaagcattagcctccaatcctacgaatctggactttgggaagcctgataaatggg 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 tagaagaagcattagcctccaatcctacgaatctggactttgggaagcctgataaatggg 586
Query: 641 tggctccctatcccaaatatgaatctggatggtgggaaaccttcttgctccctgcacaga 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 tggctccctatcccaaatatgaatctggatggtgggaaaccttcttgctccctgcacaga 646
Query: 701 aagaggtgtagtct 714
||||||||||||||
Sbjct: 647 aagaggtgtagtct 660
>gnl|LJGI|TC61472 similar to UniRef100_Q6NLE1 Cluster: At5g58250; n=1; Arabidopsis
thaliana|Rep: At5g58250 - Arabidopsis thaliana
(Mouse-ear cress), partial (46%)
Length = 783
Score = 1158 bits (584), Expect = 0.0
Identities = 584/584 (100%)
Strand = Plus / Plus
Query: 1 atgatgctaggtgtggcaactctcactctaggctcatcaactgcaatggcagctcagagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 atgatgctaggtgtggcaactctcactctaggctcatcaactgcaatggcagctcagagc 235
Query: 61 caagctcaacaccccaccactcttgcctctgtcaatgcactcacaggagttaaaaggcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 caagctcaacaccccaccactcttgcctctgtcaatgcactcacaggagttaaaaggcac 295
Query: 121 agtctttcttataggactcactctttgcctatgaatttggtctcccccaccaatcaaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 agtctttcttataggactcactctttgcctatgaatttggtctcccccaccaatcaaaat 355
Query: 181 gtcaccttgttctcttccttcaaggaaccaacacctgctgctgctccctttaccacagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gtcaccttgttctcttccttcaaggaaccaacacctgctgctgctccctttaccacagct 415
Query: 241 gttgcagctgttgattctgacaacctcagttcttctgatcctgccacaaagaaagaagcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gttgcagctgttgattctgacaacctcagttcttctgatcctgccacaaagaaagaagcc 475
Query: 301 aacaagtattactttgttattgcgaatgcaaaatttatgctggatgaggaggagcatttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 aacaagtattactttgttattgcgaatgcaaaatttatgctggatgaggaggagcatttc 535
Query: 361 agagaagtcttgtttgaaaggcttcgtctctttgaagagcgtaaaatggaacaggatttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 agagaagtcttgtttgaaaggcttcgtctctttgaagagcgtaaaatggaacaggatttc 595
Query: 421 tggcttgtcattgaacctaagttcttggatagattccctggcattaccaagagattaggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 tggcttgtcattgaacctaagttcttggatagattccctggcattaccaagagattaggg 655
Query: 481 agacctgctgtggctcttgtgtcaaccaatggtccctggatcacatacatgaagttaagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 agacctgctgtggctcttgtgtcaaccaatggtccctggatcacatacatgaagttaagg 715
Query: 541 ttagaccgagttttatcagaaagttttgaggctgagagcataga 584
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 ttagaccgagttttatcagaaagttttgaggctgagagcataga 759
>gnl|LJGI|TC64827 similar to UniRef100_Q6NLE1 Cluster: At5g58250; n=1; Arabidopsis
thaliana|Rep: At5g58250 - Arabidopsis thaliana
(Mouse-ear cress), partial (63%)
Length = 835
Score = 1128 bits (569), Expect = 0.0
Identities = 569/569 (100%)
Strand = Plus / Plus
Query: 146 tgcctatgaatttggtctcccccaccaatcaaaatgtcaccttgttctcttccttcaagg 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgcctatgaatttggtctcccccaccaatcaaaatgtcaccttgttctcttccttcaagg 61
Query: 206 aaccaacacctgctgctgctccctttaccacagctgttgcagctgttgattctgacaacc 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aaccaacacctgctgctgctccctttaccacagctgttgcagctgttgattctgacaacc 121
Query: 266 tcagttcttctgatcctgccacaaagaaagaagccaacaagtattactttgttattgcga 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tcagttcttctgatcctgccacaaagaaagaagccaacaagtattactttgttattgcga 181
Query: 326 atgcaaaatttatgctggatgaggaggagcatttcagagaagtcttgtttgaaaggcttc 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 atgcaaaatttatgctggatgaggaggagcatttcagagaagtcttgtttgaaaggcttc 241
Query: 386 gtctctttgaagagcgtaaaatggaacaggatttctggcttgtcattgaacctaagttct 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gtctctttgaagagcgtaaaatggaacaggatttctggcttgtcattgaacctaagttct 301
Query: 446 tggatagattccctggcattaccaagagattagggagacctgctgtggctcttgtgtcaa 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tggatagattccctggcattaccaagagattagggagacctgctgtggctcttgtgtcaa 361
Query: 506 ccaatggtccctggatcacatacatgaagttaaggttagaccgagttttatcagaaagtt 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ccaatggtccctggatcacatacatgaagttaaggttagaccgagttttatcagaaagtt 421
Query: 566 ttgaggctgagagcatagaagaagcattagcctccaatcctacgaatctggactttggga 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ttgaggctgagagcatagaagaagcattagcctccaatcctacgaatctggactttggga 481
Query: 626 agcctgataaatgggtggctccctatcccaaatatgaatctggatggtgggaaaccttct 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 agcctgataaatgggtggctccctatcccaaatatgaatctggatggtgggaaaccttct 541
Query: 686 tgctccctgcacagaaagaggtgtagtct 714
|||||||||||||||||||||||||||||
Sbjct: 542 tgctccctgcacagaaagaggtgtagtct 570
>gnl|LJGI|AV768144 weakly similar to UniRef100_A7NXY0 Cluster: Chromosome chr6
scaffold_3, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (28%)
Length = 371
Score = 155 bits (78), Expect = 5e-37
Identities = 99/106 (93%)
Strand = Plus / Minus
Query: 587 aagcattagcctccaatcctacgaatctggactttgggaagcctgataaatgggtggctc 646
|||||||||||||||||||||||||| ||||||||||||||||| | ||||||| |||||
Sbjct: 367 aagcattagcctccaatcctacgaatttggactttgggaagcctaaaaaatggggggctc 308
Query: 647 cctatcccaaatatgaatctggatggtgggaaaccttcttgctccc 692
|| ||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 307 cccatcccaaatatgaatttggatggggggaaaccttcttgctccc 262