Miyakogusa Predicted Gene
- Lj0g3v0054399.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0054399.1 Non Chatacterized Hit- tr|F6I3H9|F6I3H9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,70.22,0,SUBFAMILY NOT NAMED,NULL; VACUOLAR PROTEIN SORTING
54,NULL; Vps54,Vps54-like; DUF2450,Vacuolar prote,CUFF.2466.1
(2976 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS353284 similar to UniRef100_A7QC25 Cluster: Chromosom... 1556 0.0
gnl|LJGI|TC60904 similar to UniRef100_UPI0000196D1B Cluster: pro... 1055 0.0
gnl|LJGI|FS345316 similar to UniRef100_A7QC25 Cluster: Chromosom... 955 0.0
gnl|LJGI|TC79356 similar to UniRef100_A7QC25 Cluster: Chromosome... 686 0.0
gnl|LJGI|TC73500 172 8e-42
>gnl|LJGI|FS353284 similar to UniRef100_A7QC25 Cluster: Chromosome chr10 scaffold_76,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_76, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 785
Score = 1556 bits (785), Expect = 0.0
Identities = 785/785 (100%)
Strand = Plus / Minus
Query: 1277 tgagtgctattttcatgatagtgcaggcacatttagtgcgggctgctgaagtgaaaaagg 1336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 tgagtgctattttcatgatagtgcaggcacatttagtgcgggctgctgaagtgaaaaagg 726
Query: 1337 ccattgaatggattttgagcaaccgtgatggtcattatgctgctgactcagttgctgctg 1396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 ccattgaatggattttgagcaaccgtgatggtcattatgctgctgactcagttgctgctg 666
Query: 1397 caattgctcatggtgctgtagccgccgaaatatctcaagaaagtgagattcatggtacta 1456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 caattgctcatggtgctgtagccgccgaaatatctcaagaaagtgagattcatggtacta 606
Query: 1457 ctttgttgccatattcaccacaaagaagtgttgccaagggtcctttccagggaaaaacaa 1516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 ctttgttgccatattcaccacaaagaagtgttgccaagggtcctttccagggaaaaacaa 546
Query: 1517 ttgatgcagtgagctcctcaaacatgtcaaaaaatttcagagctgatgtattgcgagaaa 1576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ttgatgcagtgagctcctcaaacatgtcaaaaaatttcagagctgatgtattgcgagaaa 486
Query: 1577 acgcagaagctgtctttgcagcgtgcgatgctgctcatggaagatgggcaaagcttctcg 1636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 acgcagaagctgtctttgcagcgtgcgatgctgctcatggaagatgggcaaagcttctcg 426
Query: 1637 gggtccgtgctgttctccatcctaggttgaaattgcaggagtttctaactatatacaaca 1696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gggtccgtgctgttctccatcctaggttgaaattgcaggagtttctaactatatacaaca 366
Query: 1697 tcacccaggagttcattactgctactgaaaaaattggtggaagattgggatacagcattc 1756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tcacccaggagttcattactgctactgaaaaaattggtggaagattgggatacagcattc 306
Query: 1757 gtgggacactgcagtcacaggccaaggcttttgttgattttcagcatgaatctcggatgg 1816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gtgggacactgcagtcacaggccaaggcttttgttgattttcagcatgaatctcggatgg 246
Query: 1817 cgaaaattaaggcattgcttgaccaggaaacatgggtggagatagatgttcctgaagaat 1876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 cgaaaattaaggcattgcttgaccaggaaacatgggtggagatagatgttcctgaagaat 186
Query: 1877 ttcaatccatcattaatatacttttttcatctgatgtattgacttctgggaaccttaatg 1936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 ttcaatccatcattaatatacttttttcatctgatgtattgacttctgggaaccttaatg 126
Query: 1937 gcactgaggaagataatgcacacagttacagtgataacaatgcggacgctgtacattcaa 1996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 gcactgaggaagataatgcacacagttacagtgataacaatgcggacgctgtacattcaa 66
Query: 1997 atgctgaacatcaggttgagcagactaattccatcgaaacatccaggaaaagtgcaggat 2056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 atgctgaacatcaggttgagcagactaattccatcgaaacatccaggaaaagtgcaggat 6
Query: 2057 cggat 2061
|||||
Sbjct: 5 cggat 1
>gnl|LJGI|TC60904 similar to UniRef100_UPI0000196D1B Cluster: protein binding; n=1;
Arabidopsis thaliana|Rep: protein binding - Arabidopsis
thaliana, partial (13%)
Length = 894
Score = 1055 bits (532), Expect = 0.0
Identities = 532/532 (100%)
Strand = Plus / Plus
Query: 136 gaattcgccctcatctccaccaccaaatccacctccgacatctcccgatccgacttcctc 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gaattcgccctcatctccaccaccaaatccacctccgacatctcccgatccgacttcctc 422
Query: 196 ccttacctctccgccgtcgccgatcccctccaccgcttccaccacatccgcaaccacgcc 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ccttacctctccgccgtcgccgatcccctccaccgcttccaccacatccgcaaccacgcc 482
Query: 256 accaacgagatcatcgccgatctccaacccgccgccggtgaggctctcgtcgcctgtctc 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 accaacgagatcatcgccgatctccaacccgccgccggtgaggctctcgtcgcctgtctc 542
Query: 316 cgcgaggtcccctcgctctacttcaaggaagacttccgcctcgaggatggctccacgttc 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 cgcgaggtcccctcgctctacttcaaggaagacttccgcctcgaggatggctccacgttc 602
Query: 376 cgcgccgcgtgcccgttctccgccatctccgagaacgccgcgcttcaggagaagctatcg 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 cgcgccgcgtgcccgttctccgccatctccgagaacgccgcgcttcaggagaagctatcg 662
Query: 436 cagtatcttgatgtggtcgagctgcaccttgttaaggagatctcgttgcggtcttcgtcg 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 cagtatcttgatgtggtcgagctgcaccttgttaaggagatctcgttgcggtcttcgtcg 722
Query: 496 ttctttgaggctcaagggcagttgcaggaccttaatgcgaagatcgttgaagggtgtgcg 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 ttctttgaggctcaagggcagttgcaggaccttaatgcgaagatcgttgaagggtgtgcg 782
Query: 556 cggattcgggagctgaaggatacggttcggcttatcgattccgatttggttgagtcggcg 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 cggattcgggagctgaaggatacggttcggcttatcgattccgatttggttgagtcggcg 842
Query: 616 aggcagattcagcagctcaatgctaccaggacgaacctcttggcgcttctgc 667
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 aggcagattcagcagctcaatgctaccaggacgaacctcttggcgcttctgc 894
Score = 85.7 bits (43), Expect = 1e-15
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 1 atggattccccaccttcccaacaaccgtggggaaggtcaccca 43
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 atggattccccaccttcccaacaaccgtggggaaggtcaccca 270
>gnl|LJGI|FS345316 similar to UniRef100_A7QC25 Cluster: Chromosome chr10 scaffold_76,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_76, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 822
Score = 955 bits (482), Expect = 0.0
Identities = 482/482 (100%)
Strand = Plus / Minus
Query: 1580 cagaagctgtctttgcagcgtgcgatgctgctcatggaagatgggcaaagcttctcgggg 1639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 cagaagctgtctttgcagcgtgcgatgctgctcatggaagatgggcaaagcttctcgggg 423
Query: 1640 tccgtgctgttctccatcctaggttgaaattgcaggagtttctaactatatacaacatca 1699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tccgtgctgttctccatcctaggttgaaattgcaggagtttctaactatatacaacatca 363
Query: 1700 cccaggagttcattactgctactgaaaaaattggtggaagattgggatacagcattcgtg 1759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 cccaggagttcattactgctactgaaaaaattggtggaagattgggatacagcattcgtg 303
Query: 1760 ggacactgcagtcacaggccaaggcttttgttgattttcagcatgaatctcggatggcga 1819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ggacactgcagtcacaggccaaggcttttgttgattttcagcatgaatctcggatggcga 243
Query: 1820 aaattaaggcattgcttgaccaggaaacatgggtggagatagatgttcctgaagaatttc 1879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aaattaaggcattgcttgaccaggaaacatgggtggagatagatgttcctgaagaatttc 183
Query: 1880 aatccatcattaatatacttttttcatctgatgtattgacttctgggaaccttaatggca 1939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aatccatcattaatatacttttttcatctgatgtattgacttctgggaaccttaatggca 123
Query: 1940 ctgaggaagataatgcacacagttacagtgataacaatgcggacgctgtacattcaaatg 1999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ctgaggaagataatgcacacagttacagtgataacaatgcggacgctgtacattcaaatg 63
Query: 2000 ctgaacatcaggttgagcagactaattccatcgaaacatccaggaaaagtgcaggatcgg 2059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ctgaacatcaggttgagcagactaattccatcgaaacatccaggaaaagtgcaggatcgg 3
Query: 2060 at 2061
||
Sbjct: 2 at 1
Score = 682 bits (344), Expect = 0.0
Identities = 344/344 (100%)
Strand = Plus / Minus
Query: 1214 gtggaggtgcatcacttgctagcaagttaaggagcctatcatctgattgctttgtgcatc 1273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 gtggaggtgcatcacttgctagcaagttaaggagcctatcatctgattgctttgtgcatc 763
Query: 1274 ttctgagtgctattttcatgatagtgcaggcacatttagtgcgggctgctgaagtgaaaa 1333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 ttctgagtgctattttcatgatagtgcaggcacatttagtgcgggctgctgaagtgaaaa 703
Query: 1334 aggccattgaatggattttgagcaaccgtgatggtcattatgctgctgactcagttgctg 1393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 aggccattgaatggattttgagcaaccgtgatggtcattatgctgctgactcagttgctg 643
Query: 1394 ctgcaattgctcatggtgctgtagccgccgaaatatctcaagaaagtgagattcatggta 1453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 ctgcaattgctcatggtgctgtagccgccgaaatatctcaagaaagtgagattcatggta 583
Query: 1454 ctactttgttgccatattcaccacaaagaagtgttgccaagggtcctttccagggaaaaa 1513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 ctactttgttgccatattcaccacaaagaagtgttgccaagggtcctttccagggaaaaa 523
Query: 1514 caattgatgcagtgagctcctcaaacatgtcaaaaaatttcaga 1557
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 caattgatgcagtgagctcctcaaacatgtcaaaaaatttcaga 479
>gnl|LJGI|TC79356 similar to UniRef100_A7QC25 Cluster: Chromosome chr10 scaffold_76,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_76, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 657
Score = 686 bits (346), Expect = 0.0
Identities = 346/346 (100%)
Strand = Plus / Plus
Query: 2631 gaatagacctgaggaagctgacccccagcctagtcaatttgctcggtcccttacaaagga 2690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaatagacctgaggaagctgacccccagcctagtcaatttgctcggtcccttacaaagga 60
Query: 2691 agttggatacctgcaacgtgtcttgtctcgaactttgaatgatgaagatgttcatgcaat 2750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agttggatacctgcaacgtgtcttgtctcgaactttgaatgatgaagatgttcatgcaat 120
Query: 2751 tttcaggcaagtggtcattatatttcactcacaaatttccgaagcattttcaagatttga 2810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttcaggcaagtggtcattatatttcactcacaaatttccgaagcattttcaagatttga 180
Query: 2811 tataagcacttcccaagcacagaatagactatctcgggacatcaaacacattcttcaatg 2870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tataagcacttcccaagcacagaatagactatctcgggacatcaaacacattcttcaatg 240
Query: 2871 catacggtcattgccatcgggtgatttaggtaaatctgataccccaaactggggtcagct 2930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 catacggtcattgccatcgggtgatttaggtaaatctgataccccaaactggggtcagct 300
Query: 2931 ggatgaattcttggtgcaaagatttgggtctgatgctgttcagtag 2976
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggatgaattcttggtgcaaagatttgggtctgatgctgttcagtag 346
>gnl|LJGI|TC73500
Length = 841
Score = 172 bits (87), Expect = 8e-42
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 2890 ggtgatttaggtaaatctgataccccaaactggggtcagctggatgaattcttggtgcaa 2949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 ggtgatttaggtaaatctgataccccaaactggggtcagctggatgaattcttggtgcaa 62
Query: 2950 agatttgggtctgatgctgttcagtag 2976
|||||||||||||||||||||||||||
Sbjct: 63 agatttgggtctgatgctgttcagtag 89