Miyakogusa Predicted Gene
- Lj0g3v0054069.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0054069.1 tr|G7JG11|G7JG11_MEDTR Photosystem II CP43
chlorophyll apoprotein OS=Medicago truncatula
GN=MTR_4g05,99.11,0,seg,NULL; Photosystem I subunits PsaA/PsaB,NULL;
PSII,Photosystem antenna
protein-like,NODE_30987_length_718_cov_381.919220.path1.1
(676 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71546 homologue to UniRef100_UPI0001596BD5 Cluster: p... 1340 0.0
>gnl|LJGI|TC71546 homologue to UniRef100_UPI0001596BD5 Cluster: photosystem II CP43
chlorophyll apoprotein; n=1; Medicago truncatula|Rep:
photosystem II CP43 chlorophyll apoprotein - Medicago
truncatula, complete
Length = 3843
Score = 1340 bits (676), Expect = 0.0
Identities = 676/676 (100%)
Strand = Plus / Plus
Query: 1 atgactaccattttgggtattcacttaatcttgttaggtataggggcttttcttctagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1964 atgactaccattttgggtattcacttaatcttgttaggtataggggcttttcttctagta 2023
Query: 61 ttcaaggcttcttattttgggggtatatatgatacttgggctcccgggggaggagatgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2024 ttcaaggcttcttattttgggggtatatatgatacttgggctcccgggggaggagatgta 2083
Query: 121 agaaaaattaccaatttgacccttagtccaagtattatatttggttatttactaaaatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2084 agaaaaattaccaatttgacccttagtccaagtattatatttggttatttactaaaatca 2143
Query: 181 ccttttgggggagaggggtggattgttagtgtggacgatttggaagacataattggggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2144 ccttttgggggagaggggtggattgttagtgtggacgatttggaagacataattggggga 2203
Query: 241 catgtatggttgggttccatttgtatacttggtggaatctggcatattttaacaaaaccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2204 catgtatggttgggttccatttgtatacttggtggaatctggcatattttaacaaaaccc 2263
Query: 301 tttgcatgggctcggcgtgcactagtatggtctggagaagcttacttgtcttatagttta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2264 tttgcatgggctcggcgtgcactagtatggtctggagaagcttacttgtcttatagttta 2323
Query: 361 gcagctttatccgtttttggttttattgcttgttgctttgtctggtttaataataccgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2324 gcagctttatccgtttttggttttattgcttgttgctttgtctggtttaataataccgct 2383
Query: 421 tatcctagtgagttttatggacccactggaccagaagcttctcaagctcaagcatttact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2384 tatcctagtgagttttatggacccactggaccagaagcttctcaagctcaagcatttact 2443
Query: 481 tttctagttagagaccaacgtcttggggctaatgtaggatccgctcaagggcctaccggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2444 tttctagttagagaccaacgtcttggggctaatgtaggatccgctcaagggcctaccggt 2503
Query: 541 ttaggtaaatacctaatgcgttctccgaccggagaagtcatttttggaggagaaactatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2504 ttaggtaaatacctaatgcgttctccgaccggagaagtcatttttggaggagaaactatg 2563
Query: 601 cggttttgggatcttcgtgctccttggttggaacctctaaggggtccaaatggtttggac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2564 cggttttgggatcttcgtgctccttggttggaacctctaaggggtccaaatggtttggac 2623
Query: 661 ttgagtagactcaaaa 676
||||||||||||||||
Sbjct: 2624 ttgagtagactcaaaa 2639