Miyakogusa Predicted Gene
- Lj0g3v0050259.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0050259.2 Non Chatacterized Hit- tr|I1K538|I1K538_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.50976
PE,86.09,0,Mg_trans_NIPA,Magnesium transporter NIPA; Multidrug
resistance efflux transporter EmrE,NULL; seg,NUL,CUFF.2398.2
(1029 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS332886 similar to UniRef100_A7PKM9 Cluster: Chromosom... 1108 0.0
gnl|LJGI|DC598758 similar to UniRef100_A7QLQ6 Cluster: Chromosom... 410 e-114
gnl|LJGI|TC72648 similar to UniRef100_A7PKM9 Cluster: Chromosome... 307 7e-83
gnl|LJGI|FS339969 similar to UniRef100_A7PKM9 Cluster: Chromosom... 272 4e-72
gnl|LJGI|TC74430 similar to UniRef100_A7PKM9 Cluster: Chromosome... 272 4e-72
gnl|LJGI|TC73323 UniRef100_A7PKM9 Cluster: Chromosome chr7 scaff... 98 1e-19
>gnl|LJGI|FS332886 similar to UniRef100_A7PKM9 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (55%)
Length = 801
Score = 1108 bits (559), Expect = 0.0
Identities = 588/600 (98%), Gaps = 12/600 (2%)
Strand = Plus / Plus
Query: 1 atgacctcaaccaatttcaccggtttcatcttggccgtggtttccagtgctttcatcggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 atgacctcaaccaatttcaccggtttcatcttggccgtggtttccagtgctttcatcggc 261
Query: 61 tccagcttcatcatcaagaaaaagggtcttcaactcgccggtgttaacggt--------- 111
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tccagcttcatcatcaagaaaaagggtcttcaactcgccggtgttaacggtcctcgtgcc 321
Query: 112 ---gttggtggctatggttacttgcttcaacctctctggtgggtcggaatgattaccatg 168
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 agtgttggtggctatggttacttgcttcaacctctctggtgggtcggaatgattaccatg 381
Query: 169 attgttggagagatagcgaatttcgttgcatacatttacgccccggctgtgcttgttact 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 attgttggagagatagcgaatttcgttgcatacatttacgccccggctgtgcttgttact 441
Query: 229 ccacttggtgctttgagtattattgttagtgctgtcttagcgcatttcctcttggaggag 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ccacttggtgctttgagtattattgttagtgctgtcttagcgcatttcctcttggaggag 501
Query: 289 aagctgcagaaaatgggcatgctggggtgtcttctatgcattgtgggatctactgttatt 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 aagctgcagaaaatgggcatgctggggtgtcttctatgcattgtgggatctactgttatt 561
Query: 349 gtgctccatgctcctgaagagatgtctcttagttctgtgcaagaaatttgggaactggcc 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gtgctccatgctcctgaagagatgtctcttagttctgtgcaagaaatttgggaactggcc 621
Query: 409 gttcaacccgcgttcctctcgtacacggccgcagccattgccgtgacattggctcttgtt 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gttcaacccgcgttcctctcgtacacggccgcagccattgccgtgacattggctcttgtt 681
Query: 469 ttgtatattgcgccccgctttggccagactaatattttggtttatgttggaatatgctct 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ttgtatattgcgccccgctttggccagactaatattttggtttatgttggaatatgctct 741
Query: 529 gtaattgggtccttaactgtcatgagtgtgaaagcaattggcattgcaatgaaacttaca 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 gtaattgggtccttaactgtcatgagtgtgaaagcaattggcattgcaatgaaacttaca 801
>gnl|LJGI|DC598758 similar to UniRef100_A7QLQ6 Cluster: Chromosome chr18 scaffold_121,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_121, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (52%)
Length = 568
Score = 410 bits (207), Expect = e-114
Identities = 465/551 (84%)
Strand = Plus / Plus
Query: 258 tgctgtcttagcgcatttcctcttggaggagaagctgcagaaaatgggcatgctggggtg 317
||||||| | || |||||| | |||| ||||||||||||||| ||||| ||||| |||||
Sbjct: 1 tgctgtcctggcacatttcatgttgggggagaagctgcagaagatgggtatgctagggtg 60
Query: 318 tcttctatgcattgtgggatctactgttattgtgctccatgctcctgaagagatgtctct 377
|||||| || || ||||| || ||| | |||||||||||||| ||| | || | ||||||
Sbjct: 61 tcttctctgtatagtggggtccactatgattgtgctccatgcgcctcaggaaaagtctct 120
Query: 378 tagttctgtgcaagaaatttgggaactggccgttcaacccgcgttcctctcgtacacggc 437
||||||||||| ||||| ||| || |||| |||||||| || || || |||||| ||
Sbjct: 121 tagttctgtgctggaaatatggcaattggctgttcaaccagcatttcttatgtacacagc 180
Query: 438 cgcagccattgccgtgacattggctcttgttttgtatattgcgccccgctttggccagac 497
|||| || || || ||||| ||| |||||||| ||| ||||||| |||||||||
Sbjct: 181 ttcagcaatggctgtaacattctttctgattttgtattgtgctccccgctatggccagac 240
Query: 498 taatattttggtttatgttggaatatgctctgtaattgggtccttaactgtcatgagtgt 557
||||||||| || ||| ||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 241 taatatttttgtgtatattggaatatgctccataattggatccttaactgtcatgagtgt 300
Query: 558 gaaagcaattggcattgcaatgaaacttacattagaaggcgcaaaccagtttttctactt 617
||||||||||||||||| || ||||||||||| || || |||||||||||||||||| |
Sbjct: 301 aaaagcaattggcattgctataaaacttacattggatggtgcaaaccagtttttctacat 360
Query: 618 tcagacatggattttttctacggttgctattacctgcatcattatccagctaaattacct 677
|| |||||||||||| | |||||||||||| |||||||||||| || ||||||||||
Sbjct: 361 tccgacatggattttcacaacggttgctatttcctgcatcattactcaattaaattacct 420
Query: 678 taatatggcactggataactttaatgcagcagttgtttctccaatctattatgcattgtt 737
||||||||| ||||||| || || |||||||||||||||| ||||||||||| |||||
Sbjct: 421 taatatggctctggatattttcaacacagcagttgtttctcctatctattatgccttgtt 480
Query: 738 cacagcttttacaatattagccagtttaatcatgtttaaggactattctggtcaaagtat 797
|||| |||||||||||||||| || ||||||||||||||| |||||||||||||||||
Sbjct: 481 cacatcttttacaatattagctagcgcaatcatgtttaaggattattctggtcaaagtat 540
Query: 798 aagcagtattg 808
||||| |||||
Sbjct: 541 aagcaatattg 551
>gnl|LJGI|TC72648 similar to UniRef100_A7PKM9 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 586
Score = 307 bits (155), Expect = 7e-83
Identities = 170/175 (97%)
Strand = Plus / Plus
Query: 855 attgcacagtacaagagaaccggatcctccagccattacagatttatatacaccattgtc 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attgcacagtacaagagaaccggatcctccagccattacagatttatatacaccattgtc 60
Query: 915 tcctagagtatcatggtatatccaaggcaatggtgaaccctggaaacagaaagaggaaga 974
|| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 61 tcttagagtatcatggtatatccaaggccatggtgaactctggaaacagaaagaggaaga 120
Query: 975 tgttccacccattaatttaatcacaattatacggcaagatcatttcaagtgacag 1029
|||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 121 tgttccaccccttaatttaatcactattatacggcaagatcatttcaagtgacag 175
>gnl|LJGI|FS339969 similar to UniRef100_A7PKM9 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 763
Score = 272 bits (137), Expect = 4e-72
Identities = 166/178 (93%), Gaps = 12/178 (6%)
Strand = Plus / Plus
Query: 1 atgacctcaaccaatttcaccggtttcatcttggccgtggtttccagtgctttcatcggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 atgacctcaaccaatttcaccggtttcatcttggccgtggtttccagtgctttcatcggc 196
Query: 61 tccagcttcatcatcaagaaaaagggtcttcaactcgccggtgttaacg----------- 109
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tccagcttcatcatcaagaaaaagggtcttcaactcgccggtgttaacggtcctcgtgcc 256
Query: 110 -gtgttggtggctatggttacttgcttcaacctctctggtgggtcggaatgattacca 166
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 agtgttggtggctatggttacttgcttcaacctctctggtgggtcggaatgattacca 314
>gnl|LJGI|TC74430 similar to UniRef100_A7PKM9 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 606
Score = 272 bits (137), Expect = 4e-72
Identities = 137/137 (100%)
Strand = Plus / Plus
Query: 893 cagatttatatacaccattgtctcctagagtatcatggtatatccaaggcaatggtgaac 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 cagatttatatacaccattgtctcctagagtatcatggtatatccaaggcaatggtgaac 137
Query: 953 cctggaaacagaaagaggaagatgttccacccattaatttaatcacaattatacggcaag 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 cctggaaacagaaagaggaagatgttccacccattaatttaatcacaattatacggcaag 197
Query: 1013 atcatttcaagtgacag 1029
|||||||||||||||||
Sbjct: 198 atcatttcaagtgacag 214
>gnl|LJGI|TC73323 UniRef100_A7PKM9 Cluster: Chromosome chr7 scaffold_20, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_20, whole genome shotgun sequence - Vitis
vinifera (Grape), partial (5%)
Length = 543
Score = 97.6 bits (49), Expect = 1e-19
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 285 ggagaagctgcagaaaatgggcatgctggggtgtcttctatgcattgtgggat 337
||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 37 ggagaagctgcagaaaatgggcatgctggggtgtcttctatgcatcgtgggat 89