Miyakogusa Predicted Gene

Lj0g3v0050189.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0050189.1 Non Chatacterized Hit- tr|B9RHP5|B9RHP5_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,22.69,0.000000000004,seg,NULL,CUFF.2387.1
         (1926 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP047544                                                     254   2e-66

>gnl|LJGI|BP047544 
          Length = 381

 Score =  254 bits (128), Expect = 2e-66
 Identities = 171/185 (92%), Gaps = 4/185 (2%)
 Strand = Plus / Minus

                                                                        
Query: 1742 ctgctggtttgttgttcatgtatttgcacctaaggaagaatggtggagaaaaagcagcac 1801
            ||||||||||||||||||||||||||||||||||    ||||||||||||||||| || |
Sbjct: 381  ctgctggtttgttgttcatgtatttgcacctaag----aatggtggagaaaaagccgccc 326

                                                                        
Query: 1802 taccaccgactaaggcatctagtcataaagataaagagaagattcagcaatattcatctc 1861
            |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 325  tacccccgactaaggcatctagtcataaagataaagagaagattcagccatattcatctc 266

                                                                        
Query: 1862 agaaagtaaagataagcacaacaaaaggggtttatccagctgaacagctccagttaaagt 1921
            ||||||||||||||||| | || |||||||||||||| ||||||| ||||| ||||||||
Sbjct: 265  agaaagtaaagataagccccaccaaaggggtttatcccgctgaaccgctcccgttaaagt 206

                 
Query: 1922 gatta 1926
            |||||
Sbjct: 205  gatta 201