Miyakogusa Predicted Gene
- Lj0g3v0049109.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0049109.1 CUFF.2301.1
(567 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63980 698 0.0
gnl|LJGI|TC79128 similar to UniRef100_A5FK14 Cluster: NLP/P60 pr... 553 e-157
gnl|LJGI|FS337427 similar to UniRef100_Q6NWZ1 Cluster: CKAP4 pro... 418 e-116
gnl|LJGI|TC80456 similar to UniRef100_Q0DWU2 Cluster: Os02g07951... 248 3e-65
gnl|LJGI|TC74487 115 3e-25
gnl|LJGI|TC66278 weakly similar to UniRef100_Q6FJK4 Cluster: Can... 56 2e-07
>gnl|LJGI|TC63980
Length = 799
Score = 698 bits (352), Expect = 0.0
Identities = 416/435 (95%), Gaps = 3/435 (0%)
Strand = Plus / Plus
Query: 108 caatttcaaccgccacgaccagaatttaaacgaccattttgtctcaactgctattttcgg 167
|||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||
Sbjct: 366 caatttcaaccgccacaaccagaatttaaacgaccattttgtctcaactgctactt-cgg 424
Query: 168 agtttgcaaccgctcatgctttctcaaccgccactctgggtcgaaatcgtccatgttcgc 227
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 425 agtttgcaaccgctcatgctttctcaaccgacactctgggtcgaaatcgtccatgttcgc 484
Query: 228 ccatgagttcaataaaaccaaattgattcaggaccattcaaacagatccttgttcctcca 287
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 485 ccatgagttcaatcaaaccaaattgattcaggaccattcaaacagatccttgttccttca 544
Query: 288 aatatttcttctactttctgtttcagttttgtttccattagatttgtgctccgattatca 347
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 aatatttcttctactttctatttcagttttgtttccattagatttgtgctccgattatca 604
Query: 348 atggtttgaaattaattccatcattcttttctttgtgtttgatacgagaaagaggggggc 407
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 605 atggtttgaaattaattccatcattcttttctttgtgtttgatacgagaaagagaggagc 664
Query: 408 atggcggattaagaagaaggagcttatgagttggagcacaccaactgttcgacgaaatgc 467
||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||
Sbjct: 665 atggcggattaagaagaaggagcatataagttggaacacaccaactgttcgacgaaatgc 724
Query: 468 ttcagccaaactttgcatcttcaaatgccataa--tgcttgtcaattctgtcatcatgta 525
|||||| ||||||||||||||| |||||||||| |||||||||| || |||||||||||
Sbjct: 725 ttcagcaaaactttgcatcttcgaatgccataatgtgcttgtcaactccgtcatcatgta 784
Query: 526 ccagggcagtgttat 540
|||||||||| ||||
Sbjct: 785 ccagggcagttttat 799
>gnl|LJGI|TC79128 similar to UniRef100_A5FK14 Cluster: NLP/P60 protein precursor;
n=1; Flavobacterium johnsoniae UW101|Rep: NLP/P60
protein precursor - Flavobacterium johnsoniae UW101,
partial (10%)
Length = 712
Score = 553 bits (279), Expect = e-157
Identities = 307/315 (97%), Gaps = 1/315 (0%)
Strand = Plus / Plus
Query: 108 caatttcaaccgccacgaccagaatttaaacgaccattttgtctcaactgctattttcgg 167
|||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||
Sbjct: 399 caatttcaaccgccacaaccagaatttaaacgaccattttgtctcaactgctactt-cgg 457
Query: 168 agtttgcaaccgctcatgctttctcaaccgccactctgggtcgaaatcgtccatgttcgc 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 agtttgcaaccgctcatgctttctcaaccgccactctgggtcgaaatcgtccatgttcgc 517
Query: 228 ccatgagttcaataaaaccaaattgattcaggaccattcaaacagatccttgttcctcca 287
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 518 ccatgagttcaatcaaaccaaattgattcaggaccattcaaacagatccttgttccttca 577
Query: 288 aatatttcttctactttctgtttcagttttgtttccattagatttgtgctccgattatca 347
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 aatatttcttctactttctatttcagttttgtttccattagatttgtgctccgattatca 637
Query: 348 atggtttgaaattaattccatcattcttttctttgtgtttgatacgagaaagaggggggc 407
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 638 atggtttgaaattaattccatcattcttttctttgtgtttgatacgagaaagagaggagc 697
Query: 408 atggcggattaagaa 422
|||||||||||||||
Sbjct: 698 atggcggattaagaa 712
>gnl|LJGI|FS337427 similar to UniRef100_Q6NWZ1 Cluster: CKAP4 protein; n=2; Homo
sapiens|Rep: CKAP4 protein - Homo sapiens (Human),
partial (4%)
Length = 722
Score = 418 bits (211), Expect = e-116
Identities = 230/235 (97%), Gaps = 1/235 (0%)
Strand = Plus / Plus
Query: 1 atggagaaccacctctgtagccggacctggttcaaaaccatcaacagatcccaattcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 atggagaaccacctctgtagccggacctggttcaaaaccatcaacagatcccaattcatt 548
Query: 61 cattttggaactgcacaaccgccacttttgagttgcaaccgcccactcaatttcaaccgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 cattttggaactgcacaaccgccacttttgagttgcaaccgcccactcaatttcaaccgc 608
Query: 121 cacgaccagaatttaaacgaccattttgtctcaactgctattttcggagtttgcaaccgc 180
|||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 609 cacgaccagaatttaaacgaccattttgtctcaactgcta-ttagggagtttgcaaccgc 667
Query: 181 tcatgctttctcaaccgccactctgggtcgaaatcgtccatgttcgcccatgagt 235
|| |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 tcttgctttctcatccgccactctgggtcgaaatcgtccatgttcgcccatgagt 722
>gnl|LJGI|TC80456 similar to UniRef100_Q0DWU2 Cluster: Os02g0795100 protein; n=1;
Oryza sativa Japonica Group|Rep: Os02g0795100 protein -
Oryza sativa subsp. japonica (Rice), partial (10%)
Length = 513
Score = 248 bits (125), Expect = 3e-65
Identities = 185/201 (92%), Gaps = 3/201 (1%)
Strand = Plus / Plus
Query: 1 atggagaaccacctctgtagccggacctggttcaaaaccatcaacagatcccaattcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 atggagaaccacctctgtagccggacctggttcaaaaccatcaacagatcccaattcatt 317
Query: 61 cattttggaactgcacaaccgccacttttgagttgcaaccgcccactcaatttcaaccgc 120
||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 318 cattttggaacggcacaaccgccacttttgagttgcaaccgcccactcaatatcaaccgc 377
Query: 121 cacgaccagaatttaaacgaccattttgtctcaactgctattttcggagtttgcaaccgc 180
|| | | ||||||||| | ||||||||||||||||| | ||| ||| ||||||||||
Sbjct: 378 caactcta-aatttaaactatcattttgtctcaactgcca-cttcagag-ttgcaaccgc 434
Query: 181 tcatgctttctcaaccgccac 201
||||| | |||||||||||||
Sbjct: 435 tcatgttgtctcaaccgccac 455
>gnl|LJGI|TC74487
Length = 1038
Score = 115 bits (58), Expect = 3e-25
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 422 agaaggagcttatgagttggagcacaccaactgttcgacgaaatgcttcagccaaacttt 481
|||| |||| |||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 783 agaatgagcctatgagttagagcacaccaactgttcgacgaaatgcttcagcgaaacttt 842
Query: 482 gcatcttcaaatgccataatgc 503
| |||||| |||||||||||||
Sbjct: 843 gtatcttcgaatgccataatgc 864
>gnl|LJGI|TC66278 weakly similar to UniRef100_Q6FJK4 Cluster: Candida glabrata strain
CBS138 chromosome M complete sequence; n=1; Candida
glabrata|Rep: Candida glabrata strain CBS138 chromosome
M complete sequence - Candida glabrata (Yeast)
(Torulopsis glabrata), partial (5%)
Length = 763
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 432 tatgagttggagcacaccaactgttcgacgaaatgcttca 471
||||||| ||| ||||||||||||| ||||||||||||||
Sbjct: 706 tatgagtgggaacacaccaactgtttgacgaaatgcttca 745