Miyakogusa Predicted Gene
- Lj0g3v0049089.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0049089.1 Non Chatacterized Hit- tr|I1NKV0|I1NKV0_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,27.78,8e-17,FAMILY NOT NAMED,NULL; seg,NULL;
Frigida,Frigida-like,CUFF.2385.1
(1593 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82081 weakly similar to UniRef100_A7PER4 Cluster: Chr... 1723 0.0
gnl|LJGI|TC72867 weakly similar to UniRef100_A7PER4 Cluster: Chr... 1322 0.0
gnl|LJGI|TC71297 347 1e-94
>gnl|LJGI|TC82081 weakly similar to UniRef100_A7PER4 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (32%)
Length = 928
Score = 1723 bits (869), Expect = 0.0
Identities = 878/881 (99%)
Strand = Plus / Plus
Query: 713 tggtgtgctttgggttgaggtccaggttcgatgaggagtatttgaggaagctggtcatgg 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggtgtgctttgggttgaggtccaggttcgatgaggagtatttgaggaagctggtcatgg 60
Query: 773 agtttggtaccaggagggatatggcaaagcttgctgcttcattggatttcggcgacgaga 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agtttggtaccaggagggatatggcaaagcttgctgcttcattggatttcggcgacgaga 120
Query: 833 tgatagaaattatagaagaactagttaaaaatggccaagagatagaagctgtttattttg 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgatagaaattatagaagaactagttaaaaatggccaagagatagaagctgtttattttg 180
Query: 893 cttcagaatctggtttgactgagaagtttcctcctatcgacctgctcaagtcttacgttc 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cttcagaatctggtttgactgagaagtttcctcctatcgacctgctcaagtcttacgttc 240
Query: 953 gaaactacaaaaagaatgttgctaccatattagcgaagggaaacaacagtcaggctgcaa 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaaactacaaaaagaatgttgctaccatattagcgaagggaaacaacagtcaggctgcaa 300
Query: 1013 cggatgaatcaagtactcttgagatgaattccataagggctataatcagatgtgtagaag 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cggatgaatcaagtactcttgagatgaattccataagggctataatcagatgtgtagaag 360
Query: 1073 atcacaaacttgaatccgaattcagccttgataaactgaggaagcgggttacccatttgg 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atcacaaacttgaatccgaattcagccttgataaactgaggaagcgggttacccatttgg 420
Query: 1133 ggagaactaaggctgaaaggaagaggagttcatcaactgtaattaggcctccgaaaaagc 1192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggagaactaaggctgaaaggaagaggagttcatcaactgtaattaggcctccgaaaaagc 480
Query: 1193 gagcctacggatcaggtggcggtcgtggtaacagttccagctcttcccgtccagccaaat 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gagcctacggatcaggtggcggtcgtggtaacagttccagctcttcccgtccagccaaat 540
Query: 1253 cagcaaaacccaatgcataccgaccatcttttagtcgcaggaacctggcaccaccctctc 1312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cagcaaaacccaatgcataccgaccatcttttagtcgcaggaacctggcaccaccctctc 600
Query: 1313 tacagcctagtccaagtgcaagattttctggaccattcagctaccccagccagactatat 1372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tacagcctagtccaagtgcaagattttctggaccattcagctaccccagccagactatat 660
Query: 1373 tggatggttccagtgctaatccttacgcggcagcaacctatggaacctcccacacacaaa 1432
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 661 tggatggttccagtgctaatccttacgcggcagcaacctatggaacctgccacacacaaa 720
Query: 1433 gcccagctggaatatcacaacagcactactcactccctgttgacaatttgggtcccctcg 1492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gcccagctggaatatcacaacagcactactcactccctgttgacaatttgggtcccctcg 780
Query: 1493 gttaccgatctagtggttcttatgcaggtcagaatagctacaggatgtacgattatggaa 1552
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 781 gttaccgatctagtggttcttatgcaggtcagaataggtacgggatgtacgattatggaa 840
Query: 1553 atgctgctccacctacttatcagtctccatacacattagat 1593
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 atgctgctccacctacttatcagtctccatacacattagat 881
>gnl|LJGI|TC72867 weakly similar to UniRef100_A7PER4 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (31%)
Length = 741
Score = 1322 bits (667), Expect = 0.0
Identities = 670/671 (99%)
Strand = Plus / Plus
Query: 1 atggcgaccaaattggcaacaacaccaccctctgacagggtcgaacaattcttccaggaa 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 71 atggcgaccaaattggcaacaacaccaccctcagacagggtcgaacaattcttccaggaa 130
Query: 61 ctgcaaacccacaagagcatcatcgccacctgcaccgacctattcaccaccctctccacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 ctgcaaacccacaagagcatcatcgccacctgcaccgacctattcaccaccctctccacc 190
Query: 121 cacttctcctccctccaacattccctctccgagaaaacccaatccctcgaatccaagttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 cacttctcctccctccaacattccctctccgagaaaacccaatccctcgaatccaagttc 250
Query: 181 caaaccctagattcccactacaatgaaaccctcgaatcgctcaacacccacgagacctcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 caaaccctagattcccactacaatgaaaccctcgaatcgctcaacacccacgagacctcc 310
Query: 241 atcccggagcgcgagtccgccgctgccgctcgtatcgacgagcagaaggaagccgctatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 atcccggagcgcgagtccgccgctgccgctcgtatcgacgagcagaaggaagccgctatc 370
Query: 301 gctgagttccgaaacccccttccgtcggactccgaattgcccgccacgttgaaatccctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gctgagttccgaaacccccttccgtcggactccgaattgcccgccacgttgaaatccctt 430
Query: 361 tcgcggaagatggactcttccgcgttgttgcggttcattgtttccaagcggaaggagtcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tcgcggaagatggactcttccgcgttgttgcggttcattgtttccaagcggaaggagtcg 490
Query: 421 tcgtggctgagggcggagatagcgccggcgatagcggaggcggtggacccgccgaagctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tcgtggctgagggcggagatagcgccggcgatagcggaggcggtggacccgccgaagctg 550
Query: 481 gtgttggacgcggtggaggaatttctcaatagcaaaatgatgggttctaagtctgggctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gtgttggacgcggtggaggaatttctcaatagcaaaatgatgggttctaagtctgggctc 610
Query: 541 accgataagaggtgggcatgtgggcttctggttcaggctctgagttcggactcgccgggg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 accgataagaggtgggcatgtgggcttctggttcaggctctgagttcggactcgccgggg 670
Query: 601 ttctctagaagggttgttgagagagctgtgggtctcttggattcgtggaaggagcagatg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 ttctctagaagggttgttgagagagctgtgggtctcttggattcgtggaaggagcagatg 730
Query: 661 gatagtgatac 671
|||||||||||
Sbjct: 731 gatagtgatac 741
>gnl|LJGI|TC71297
Length = 584
Score = 347 bits (175), Expect = 1e-94
Identities = 175/175 (100%)
Strand = Plus / Plus
Query: 1419 ctcccacacacaaagcccagctggaatatcacaacagcactactcactccctgttgacaa 1478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcccacacacaaagcccagctggaatatcacaacagcactactcactccctgttgacaa 60
Query: 1479 tttgggtcccctcggttaccgatctagtggttcttatgcaggtcagaatagctacaggat 1538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttgggtcccctcggttaccgatctagtggttcttatgcaggtcagaatagctacaggat 120
Query: 1539 gtacgattatggaaatgctgctccacctacttatcagtctccatacacattagat 1593
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtacgattatggaaatgctgctccacctacttatcagtctccatacacattagat 175