Miyakogusa Predicted Gene
- Lj0g3v0048539.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0048539.1 Non Chatacterized Hit- tr|I1LDY9|I1LDY9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.44585 PE,87.45,0,no
description,NULL; PAZ,Argonaute/Dicer protein, PAZ; PIWI,Stem cell
self-renewal protein Piwi; SUB,CUFF.2249.1
(2922 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76231 similar to UniRef100_Q9XGW1 Cluster: Protein PI... 466 e-130
gnl|LJGI|BP042223 homologue to UniRef100_Q9XGW1 Cluster: Protein... 391 e-107
gnl|LJGI|TC71255 similar to UniRef100_A7NWU9 Cluster: Chromosome... 129 1e-28
gnl|LJGI|TC81970 homologue to UniRef100_A1E5M3 Cluster: Argonaut... 111 3e-23
gnl|LJGI|TC69545 similar to UniRef100_A7PQL8 Cluster: Chromosome... 82 2e-14
gnl|LJGI|TC74389 homologue to UniRef100_A1E5M3 Cluster: Argonaut... 74 5e-12
gnl|LJGI|AU088885 homologue to UniRef100_A7QK09 Cluster: Chromos... 56 1e-06
>gnl|LJGI|TC76231 similar to UniRef100_Q9XGW1 Cluster: Protein PINHEAD; n=2;
Arabidopsis thaliana|Rep: Protein PINHEAD - Arabidopsis
thaliana (Mouse-ear cress), partial (7%)
Length = 622
Score = 466 bits (235), Expect = e-130
Identities = 272/278 (97%), Gaps = 6/278 (2%)
Strand = Plus / Plus
Query: 2651 atttcactgctgatgggattcagtctttgacaaacaatctctgttatacatatgcgaggt 2710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atttcactgctgatgggattcagtctttgacaaacaatctctgttatacatatgcgaggt 60
Query: 2711 gtacacgctctgtctctgttgttcctccagcatattatgcacacttggccgcatttcgag 2770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtacacgctctgtctctgttgttcctccagcatattatgcacacttggccgcatttcgag 120
Query: 2771 ctcgtttctatgcgggaccggaagagctgcaggagaatggctccaca-ggtactggacat 2829
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 121 ctcgtttctatgcgggaccggaagagctgcaggagaatggctccacagggtactggacat 180
Query: 2830 ggttcc-aaggtaac-aagagcagctggagagtgtggtgtgaagcca-ttgccagccttg 2886
|||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 181 ggttccaaaggtaacaaagagcagctggagagtgtggtgtgaagccatttgccagccttg 240
Query: 2887 --aaagaaaatgtgaagagagtgatgttttattgttaa 2922
||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaaaagaaaatgtgaagagagtgatgttttattgttaa 278
>gnl|LJGI|BP042223 homologue to UniRef100_Q9XGW1 Cluster: Protein PINHEAD; n=2;
Arabidopsis thaliana|Rep: Protein PINHEAD - Arabidopsis
thaliana (Mouse-ear cress), partial (6%)
Length = 252
Score = 391 bits (197), Expect = e-107
Identities = 245/254 (96%), Gaps = 9/254 (3%)
Strand = Plus / Plus
Query: 751 ctccaaactctagacattgttctaagagagttatcatctaaaaggttttgccccattggg 810
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 ctccaaactctagacattgttctaagagagt-atcatctaaaaggttttgccccattggg 59
Query: 811 aggtccttcttttcacctgatattagaacaccacaacggcttgggcaaggattggaatct 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 aggtccttcttttcacctgatattagaacaccacaacggcttgggcaaggattggaatct 119
Query: 871 tggtgcggattttaccagagcataaggcctactcagatgggtctttcc--ctcaatatag 928
||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 120 tggtgcgga-tttaccagagcataaggcctactcagatgggtctttccnnctcaatatag 178
Query: 929 atatggcttctgctgcgttcattgaacctctccca-gtag--tggaattt--gttggcca 983
||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||
Sbjct: 179 atatggcttctgctgcgttcattgaacctctcccangtagnntggaatttgggttggcca 238
Query: 984 gctattaggaaaag 997
||||||||||||||
Sbjct: 239 gctattaggaaaag 252
>gnl|LJGI|TC71255 similar to UniRef100_A7NWU9 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (6%)
Length = 640
Score = 129 bits (65), Expect = 1e-28
Identities = 83/89 (93%)
Strand = Plus / Plus
Query: 2833 tccaaggtaacaagagcagctggagagtgtggtgtgaagccattgccagccttgaaagaa 2892
||||||| ||| ||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 116 tccaaggggacacgagtagctggagagtgtggtgttaagccattgccagccttgaaagaa 175
Query: 2893 aatgtgaagagagtgatgttttattgtta 2921
||||||||||||||||||||||| |||||
Sbjct: 176 aatgtgaagagagtgatgttttactgtta 204
>gnl|LJGI|TC81970 homologue to UniRef100_A1E5M3 Cluster: Argonaute 1; n=1; Pisum
sativum|Rep: Argonaute 1 - Pisum sativum (Garden pea),
partial (31%)
Length = 1029
Score = 111 bits (56), Expect = 3e-23
Identities = 140/168 (83%)
Strand = Plus / Plus
Query: 1429 gatccttatgcaaaggaatttgggattaaaatcagtgaaaaactagcttctgtggaagca 1488
||||||||||| ||||| ||||| || ||||||||||| || || ||| || |||||
Sbjct: 206 gatccttatgctaaggagtttggaatcaaaatcagtgagaagcttgctcaagttgaagct 265
Query: 1489 cgaattcttcctgccccttggcttaagtatcacgatagtgggaaagaaaagaattgttta 1548
|| ||||||||| | |||||||| || || || |||| ||| | ||||||| ||||| |
Sbjct: 266 cgcattcttcctccaccttggctcaaataccatgatactggtagagaaaaggattgtctt 325
Query: 1549 cctcaagttggtcagtggaatatgatgaacaagaaaatgatcaatgga 1596
||||||||||| || |||||||||||||||||||||||| ||||||||
Sbjct: 326 cctcaagttgggcaatggaatatgatgaacaagaaaatggtcaatgga 373
Score = 56.0 bits (28), Expect = 1e-06
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 1944 taagcagtacttggctaatgtgtctctgaagatcaatgtcaagatgggaggtagaaacac 2003
|||||||||||| |||||||| || ||||||| ||||| ||| | || || || |||||
Sbjct: 721 taagcagtacttagctaatgtagctttgaagattaatgtaaaggttgggggcaggaacac 780
Query: 2004 cgttcttgttgatgct 2019
|||||||||||||||
Sbjct: 781 ggttcttgttgatgct 796
>gnl|LJGI|TC69545 similar to UniRef100_A7PQL8 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 907
Score = 81.8 bits (41), Expect = 2e-14
Identities = 212/269 (78%)
Strand = Plus / Plus
Query: 2506 gataagagtgggaatatattgccaggaactgttgttgattccaaaatctgtcacccaaca 2565
||||||||||| |||||| ||||||||||||||||||| | || || |||||||
Sbjct: 221 gataagagtggaaatataatgccaggaactgttgttgacacttcgatttgccacccaagg 280
Query: 2566 gagtttgatttttacctctgcagtcatgctggcattcagggaacaagtcgtccagctcat 2625
|||||||||||||| ||| |||||||||||| ||||| ||||| || | || | |||
Sbjct: 281 gagtttgatttttatctcaacagtcatgctggaattcaaggaactagcagacctacccat 340
Query: 2626 tatcatgttctgtgggatgaaaacaatttcactgctgatgggattcagtctttgacaaac 2685
||||||||||||| ||||| || || || || ||||||| | | ||| |||||||
Sbjct: 341 tatcatgttctgtatgatgagaataactttacagctgatgagctacaggggctgacaaat 400
Query: 2686 aatctctgttatacatatgcgaggtgtacacgctctgtctctgttgttcctccagcatat 2745
||| | || || || ||||| ||||| || || || || || | |||||||| ||||||
Sbjct: 401 aatttatgctacacgtatgcaaggtgcactcgatcagtttcaatagttcctccggcatat 460
Query: 2746 tatgcacacttggccgcatttcgagctcg 2774
||||||||||| || || |||||||||||
Sbjct: 461 tatgcacacttagctgcttttcgagctcg 489
>gnl|LJGI|TC74389 homologue to UniRef100_A1E5M3 Cluster: Argonaute 1; n=1; Pisum
sativum|Rep: Argonaute 1 - Pisum sativum (Garden pea),
partial (31%)
Length = 1414
Score = 73.8 bits (37), Expect = 5e-12
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 2320 atattttacagggatggtgtgagtgaagggcagttttaccaagtt 2364
|||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 578 atattttacagggatggtgtaagtgaagggcagttttatcaagtt 622
Score = 71.9 bits (36), Expect = 2e-11
Identities = 126/156 (80%)
Strand = Plus / Plus
Query: 2511 gagtgggaatatattgccaggaactgttgttgattccaaaatctgtcacccaacagagtt 2570
|||||| ||||| ||||| || ||||| || || ||||| ||||| || ||||| |||||
Sbjct: 769 gagtggcaatattttgcctggcactgtggtggactccaagatctgccatccaacggagtt 828
Query: 2571 tgatttttacctctgcagtcatgctggcattcagggaacaagtcgtccagctcattatca 2630
|||||||| || || |||||||| || ||||| ||||| ||||| || ||||| ||
Sbjct: 829 cgatttttatctttgttcccatgctggaatccagggcacaagccgtcctgcgcattacca 888
Query: 2631 tgttctgtgggatgaaaacaatttcactgctgatgg 2666
|| |||||||| || ||||| ||||||||||||||
Sbjct: 889 cgtcctgtgggacgagaacaacttcactgctgatgg 924
Score = 56.0 bits (28), Expect = 1e-06
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 1944 taagcagtacttggctaatgtgtctctgaagatcaatgtcaagatgggaggtagaaacac 2003
|||||||||||| |||||||| || ||||||| ||||| ||| | || || || |||||
Sbjct: 202 taagcagtacttagctaatgtagctttgaagattaatgtaaaggttgggggcaggaacac 261
Query: 2004 cgttcttgttgatgct 2019
|||||||||||||||
Sbjct: 262 ggttcttgttgatgct 277
>gnl|LJGI|AU088885 homologue to UniRef100_A7QK09 Cluster: Chromosome undetermined
scaffold_109, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_109, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(9%)
Length = 381
Score = 56.0 bits (28), Expect = 1e-06
Identities = 98/122 (80%)
Strand = Plus / Plus
Query: 2545 tccaaaatctgtcacccaacagagtttgatttttacctctgcagtcatgctggcattcag 2604
||||| ||||| || ||||| ||||| |||||||| || || |||||||| || |||
Sbjct: 56 tccaagatctgccatccaacggagttcgatttttatctttgttcccatgctggaatccag 115
Query: 2605 ggaacaagtcgtccagctcattatcatgttctgtgggatgaaaacaatttcactgctgat 2664
|| ||||| ||||| || ||||| || || |||||||| | ||||| ||||||||||||
Sbjct: 116 ggcacaagccgtcctgcgcattaccacgtcctgtgggacnanaacaacttcactgctgat 175
Query: 2665 gg 2666
||
Sbjct: 176 gg 177