Miyakogusa Predicted Gene

Lj0g3v0048299.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0048299.1 tr|G7KD04|G7KD04_MEDTR Cell division control
protein-like protein OS=Medicago truncatula GN=MTR_5g09,52.59,2e-19,no
description,NULL; NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE (NUCLEAR
VCP-LIKE PROTEIN),NULL; AAA-FA,CUFF.2241.1
         (372 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66646 weakly similar to UniRef100_A7QBR7 Cluster: Chr...    78   4e-14

>gnl|LJGI|TC66646 weakly similar to UniRef100_A7QBR7 Cluster: Chromosome chr1
           scaffold_75, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr1 scaffold_75, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (13%)
          Length = 616

 Score = 77.8 bits (39), Expect = 4e-14
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                       
Query: 113 ttgatgccagtgtggatttaaatgccataggaagattggaagcttgtaaaaacctgagtg 172
           |||||||| |||||||||| |||| |||||||||| ||||||||||| ||||| ||||||
Sbjct: 166 ttgatgccggtgtggatttgaatgtcataggaagaatggaagcttgtgaaaacatgagtg 225

                  
Query: 173 gcgctga 179
           | |||||
Sbjct: 226 gtgctga 232