Miyakogusa Predicted Gene

Lj0g3v0047379.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0047379.1 Non Chatacterized Hit- tr|C5XG60|C5XG60_SORBI
Putative uncharacterized protein Sb03g043600
OS=Sorghu,56.41,6e-19,F-box domain,F-box domain, cyclin-like;
FBOX,F-box domain, cyclin-like; F-box-like,NULL; no
descript,NODE_58450_length_878_cov_48.274487.path1.1
         (501 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO036641 similar to UniRef100_A7QEZ1 Cluster: Chromosom...   831   0.0  

>gnl|LJGI|GO036641 similar to UniRef100_A7QEZ1 Cluster: Chromosome chr16 scaffold_86,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_86, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (72%)
          Length = 670

 Score =  831 bits (419), Expect = 0.0
 Identities = 429/431 (99%), Gaps = 1/431 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagggtttgcctttggaaatctgtatgaacattttctgtttcttggattaccagcat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atggagggtttgcctttggaaatctgtatgaacattttctgtttcttggattaccagcat 300

                                                                       
Query: 61  ctagcagttgctcaacaagtctgcaagaagtggaaggtcatggcttcagagaatgctata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctagcagttgctcaacaagtctgcaagaagtggaaggtcatggcttcagagaatgctata 360

                                                                       
Query: 121 tggtctaacctttttctggagagatggggaggggaccgcgctgatttttacgctccaacg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tggtctaacctttttctggagagatggggaggggaccgcgctgatttttacgctccaacg 420

                                                                       
Query: 181 ggttcaaaatcatggaaagatgtatatgaggtgcaagatcgttgtgaccgcgttggagtg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggttcaaaatcatggaaagatgtatatgaggtgcaagatcgttgtgaccgcgttggagtg 480

                                                                       
Query: 241 ggtttgaagataattagagaaggctgtgactactaccttgttcacctaggtgagatccag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggtttgaagataattagagaaggctgtgactactaccttgttcacctaggtgagatccag 540

                                                                       
Query: 301 caatatctgggttcaagaaagaatagggaacaagcaacaagccagagctgccacacttcc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 caatatctgggttcaagaaagaatagggaacaagcaacaagccagagctgccacacttcc 600

                                                                       
Query: 361 agttcagaaaaaagggacttgagtggagaaggttccctagctgaagagagatcatgtcga 420
           |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 601 agttcagaaaaaagggacttgagtggagaaagttccctagctg-agagagatcatgtcga 659

                      
Query: 421 ggaattttgga 431
           |||||||||||
Sbjct: 660 ggaattttgga 670