Miyakogusa Predicted Gene
- Lj0g3v0047099.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0047099.1 Non Chatacterized Hit- tr|I1JAE5|I1JAE5_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,97.44,9e-37,P-loop
containing nucleoside triphosphate hydrolases,NULL; DYNAMIN,Dynamin;
no description,NULL; DYN,NODE_21328_length_400_cov_77.264999.path1.1
(237 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62968 homologue to UniRef100_Q39828 Cluster: SDL5A; n... 470 e-132
gnl|LJGI|TC58474 homologue to UniRef100_Q39821 Cluster: SDL12A; ... 155 1e-37
gnl|LJGI|TC72986 homologue to UniRef100_A7QU90 Cluster: Chromoso... 123 5e-28
gnl|LJGI|FS323428 similar to UniRef100_A7P3V6 Cluster: Chromosom... 58 2e-08
gnl|LJGI|TC59606 homologue to UniRef100_A7P3V6 Cluster: Chromoso... 58 2e-08
gnl|LJGI|DC596742 homologue to UniRef100_A7PK24 Cluster: Chromos... 52 2e-06
gnl|LJGI|FS319497 similar to UniRef100_A7PK24 Cluster: Chromosom... 52 2e-06
>gnl|LJGI|TC62968 homologue to UniRef100_Q39828 Cluster: SDL5A; n=1; Glycine max|Rep:
SDL5A - Glycine max (Soybean), partial (77%)
Length = 1521
Score = 470 bits (237), Expect = e-132
Identities = 237/237 (100%)
Strand = Plus / Plus
Query: 1 atggagaacctaatctctttagtcaacaaaatccagagggcttgcaccgctctcggcgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 atggagaacctaatctctttagtcaacaaaatccagagggcttgcaccgctctcggcgac 167
Query: 61 cacggcgaagccaccgccttacccactctctgggactctctccccgccatcgccgtcgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 cacggcgaagccaccgccttacccactctctgggactctctccccgccatcgccgtcgtc 227
Query: 121 ggtggccagagctctggaaaatcctcagtgcttgaaagcgttgttggcaaggatttccta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 ggtggccagagctctggaaaatcctcagtgcttgaaagcgttgttggcaaggatttccta 287
Query: 181 cctcgtggttcaggaattgttacccggcgaccccttgttttgcagcttcaaaaaatt 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 cctcgtggttcaggaattgttacccggcgaccccttgttttgcagcttcaaaaaatt 344
>gnl|LJGI|TC58474 homologue to UniRef100_Q39821 Cluster: SDL12A; n=1; Glycine
max|Rep: SDL12A - Glycine max (Soybean), partial (37%)
Length = 826
Score = 155 bits (78), Expect = 1e-37
Identities = 129/146 (88%)
Strand = Plus / Plus
Query: 85 actctctgggactctctccccgccatcgccgtcgtcggtggccagagctctggaaaatcc 144
||||||||||| || || || || |||||||||||||||||||||||||||||||| |||
Sbjct: 229 actctctgggattcccttcctgctatcgccgtcgtcggtggccagagctctggaaagtcc 288
Query: 145 tcagtgcttgaaagcgttgttggcaaggatttcctacctcgtggttcaggaattgttacc 204
|| ||| | || |||||||||||||| |||||| |||||||||| ||||| |||||||||
Sbjct: 289 tcggtgttggagagcgttgttggcaaagatttcttacctcgtggatcagggattgttacc 348
Query: 205 cggcgaccccttgttttgcagcttca 230
|||||||| || || |||||||||||
Sbjct: 349 cggcgaccgctcgtcttgcagcttca 374
>gnl|LJGI|TC72986 homologue to UniRef100_A7QU90 Cluster: Chromosome chr2
scaffold_176, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr2 scaffold_176, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (33%)
Length = 603
Score = 123 bits (62), Expect = 5e-28
Identities = 170/206 (82%)
Strand = Plus / Plus
Query: 25 aacaaaatccagagggcttgcaccgctctcggcgaccacggcgaagccaccgccttaccc 84
||||||||||| || || |||||||| |||||||| |||||||| | | ||||| |||
Sbjct: 13 aacaaaatccaaagagcatgcaccgcgctcggcgatcacggcgaggagagtgccttgccc 72
Query: 85 actctctgggactctctccccgccatcgccgtcgtcggtggccagagctctggaaaatcc 144
||||||||||| | || ||| |||||||||||||||| || ||||| || || |||||
Sbjct: 73 actctctgggatgcccttccctccatcgccgtcgtcggaggacagagttcagggaaatct 132
Query: 145 tcagtgcttgaaagcgttgttggcaaggatttcctacctcgtggttcaggaattgttacc 204
|||||| | || ||| ||||||| |||||||| | |||||||| || |||||||||||
Sbjct: 133 tcagtgttggagagcattgttgggaaggattttttgcctcgtggatctggaattgttacg 192
Query: 205 cggcgaccccttgttttgcagcttca 230
||| | || |||||||||||||||||
Sbjct: 193 cggaggcctcttgttttgcagcttca 218
>gnl|LJGI|FS323428 similar to UniRef100_A7P3V6 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 766
Score = 58.0 bits (29), Expect = 2e-08
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 88 ctctgggactctctccccgccatcgccgtcgtcggtggccagagctctggaaaatcctca 147
|||||||| |||| ||| || |||||||||||||||| ||||| || || ||||| |||
Sbjct: 242 ctctgggaggctcttccctccgtcgccgtcgtcggtggacagagttcagggaaatcgtca 301
Query: 148 gtgcttgaaagcgttgttggcaaggatttcctacctcgtgg 188
||||| ||||| || || || | |||||| || ||||||||
Sbjct: 302 gtgctggaaagtgtggtcggaagggattttctgcctcgtgg 342
>gnl|LJGI|TC59606 homologue to UniRef100_A7P3V6 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 741
Score = 58.0 bits (29), Expect = 2e-08
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 88 ctctgggactctctccccgccatcgccgtcgtcggtggccagagctctggaaaatcctca 147
|||||||| |||| ||| || |||||||||||||||| ||||| || || ||||| |||
Sbjct: 223 ctctgggaggctcttccctccgtcgccgtcgtcggtggacagagttcagggaaatcgtca 282
Query: 148 gtgcttgaaagcgttgttggcaaggatttcctacctcgtgg 188
||||| ||||| || || || | |||||| || ||||||||
Sbjct: 283 gtgctggaaagtgtggtcggaagggattttctgcctcgtgg 323
>gnl|LJGI|DC596742 homologue to UniRef100_A7PK24 Cluster: Chromosome chr15
scaffold_19, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr15 scaffold_19, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 598
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 86 ctctctgggactctctccccgccatcgccgtcgtcggtggccagag 131
|||||||||| ||||||| || ||||||||||||||||||||||
Sbjct: 260 ctctctgggaagctctcccttccgtcgccgtcgtcggtggccagag 305
>gnl|LJGI|FS319497 similar to UniRef100_A7PK24 Cluster: Chromosome chr15 scaffold_19,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_19, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 725
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 86 ctctctgggactctctccccgccatcgccgtcgtcggtggccagag 131
|||||||||| ||||||| || ||||||||||||||||||||||
Sbjct: 265 ctctctgggaagctctcccttccgtcgccgtcgtcggtggccagag 310