Miyakogusa Predicted Gene

Lj0g3v0047079.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0047079.1 Non Chatacterized Hit- tr|Q6K2E2|Q6K2E2_ORYSJ
Putative uncharacterized protein OSJNBb0024J13.13-2 OS,45.95,1.3,
,NODE_54422_length_335_cov_34.808956.path1.1
         (225 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80098 similar to UniRef100_Q6XZA0 Cluster: UDP-glucos...   246   5e-65
gnl|LJGI|TC60473 homologue to UniRef100_O65781 Cluster: UDP-gluc...   131   2e-30
gnl|LJGI|TC65438 homologue to UniRef100_Q43070 Cluster: UDP-gluc...    64   4e-10
gnl|LJGI|TC60465 homologue to UniRef100_Q43070 Cluster: UDP-gluc...    64   4e-10

>gnl|LJGI|TC80098 similar to UniRef100_Q6XZA0 Cluster: UDP-glucose 4-epimerase; n=1;
           Solanum tuberosum|Rep: UDP-glucose 4-epimerase - Solanum
           tuberosum (Potato), partial (8%)
          Length = 473

 Score =  246 bits (124), Expect = 5e-65
 Identities = 168/188 (89%)
 Strand = Plus / Plus

                                                                       
Query: 38  aagggaacttaagtggaaggcaaaatatggaattgaagagatgtgccgtgatcaatggaa 97
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 1   aagggaacttaagtggaaggccaaatatggaattgaagagatgtgccgtgatccatggaa 60

                                                                       
Query: 98  ttgggctaacaaaaacccctttggctatgcatctcaggattgagccgattaacgttgaca 157
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 61  ttgggctaaccaaaacccctttggctatgcatctcaggattgagccgattaacgttgacc 120

                                                                       
Query: 158 attatcaccnnnnnnnnnnnnnnnngttctcttttgggttctttctcaggtttgatacac 217
           |||||||||                |||||||||||||||||||||||||||||||||||
Sbjct: 121 attatcacctatatattatatatatgttctcttttgggttctttctcaggtttgatacac 180

                   
Query: 218 cataggtt 225
           ||||||||
Sbjct: 181 cataggtt 188


>gnl|LJGI|TC60473 homologue to UniRef100_O65781 Cluster: UDP-glucose 4-epimerase
           GEPI48; n=1; Cyamopsis tetragonoloba|Rep: UDP-glucose
           4-epimerase GEPI48 - Cyamopsis tetragonoloba (Guar)
           (Cluster bean), partial (82%)
          Length = 1274

 Score =  131 bits (66), Expect = 2e-30
 Identities = 111/126 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgctggaattgtttatgcatcaacagataaagcagaaagggaacttaagtggaaggcaa 60
           |||||| |||||||||||||||||| || ||||||||||| ||||| || |||||||| |
Sbjct: 800 atgctgaaattgtttatgcatcaactgaaaaagcagaaagagaactgaactggaaggcta 859

                                                                       
Query: 61  aatatggaattgaagagatgtgccgtgatcaatggaattgggctaacaaaaacccctttg 120
           |||||||||| || || ||||| |||||||||||||| ||||||| ||||||||| | ||
Sbjct: 860 aatatggaatcgatgaaatgtgtcgtgatcaatggaactgggctagcaaaaacccttatg 919

                 
Query: 121 gctatg 126
           ||||||
Sbjct: 920 gctatg 925


>gnl|LJGI|TC65438 homologue to UniRef100_Q43070 Cluster: UDP-glucose 4-epimerase;
           n=1; Pisum sativum|Rep: UDP-glucose 4-epimerase - Pisum
           sativum (Garden pea), partial (42%)
          Length = 650

 Score = 63.9 bits (32), Expect = 4e-10
 Identities = 77/92 (83%)
 Strand = Plus / Plus

                                                                       
Query: 12  gtttatgcatcaacagataaagcagaaagggaacttaagtggaaggcaaaatatggaatt 71
           ||||||||||| ||||| ||||| || |  |||||||  ||||||||||| |||||  | 
Sbjct: 317 gtttatgcatctacagagaaagctgagaaagaacttagttggaaggcaaagtatggtgta 376

                                           
Query: 72  gaagagatgtgccgtgatcaatggaattgggc 103
           |||||||||||| | || ||||||||||||||
Sbjct: 377 gaagagatgtgcagggaccaatggaattgggc 408


>gnl|LJGI|TC60465 homologue to UniRef100_Q43070 Cluster: UDP-glucose 4-epimerase; n=1;
            Pisum sativum|Rep: UDP-glucose 4-epimerase - Pisum
            sativum (Garden pea), complete
          Length = 1457

 Score = 63.9 bits (32), Expect = 4e-10
 Identities = 77/92 (83%)
 Strand = Plus / Plus

                                                                        
Query: 12   gtttatgcatcaacagataaagcagaaagggaacttaagtggaaggcaaaatatggaatt 71
            ||||||||||| ||||| ||||| || |  |||||||  ||||||||||| |||||  | 
Sbjct: 1123 gtttatgcatctacagagaaagctgagaaagaacttagttggaaggcaaagtatggtgta 1182

                                            
Query: 72   gaagagatgtgccgtgatcaatggaattgggc 103
            |||||||||||| | || ||||||||||||||
Sbjct: 1183 gaagagatgtgcagggaccaatggaattgggc 1214