Miyakogusa Predicted Gene

Lj0g3v0047049.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0047049.1 Non Chatacterized Hit- tr|D7U601|D7U601_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,85.19,1e-18,seg,NULL,NODE_73038_length_353_cov_109.872520.path1.1
         (237 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74313 homologue to UniRef100_A7QUT0 Cluster: Chromoso...   470   e-132

>gnl|LJGI|TC74313 homologue to UniRef100_A7QUT0 Cluster: Chromosome chr1
           scaffold_180, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr1 scaffold_180, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (80%)
          Length = 558

 Score =  470 bits (237), Expect = e-132
 Identities = 237/237 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagtggagcattttggggaacgcgggttatggagattgtgaagaagcacgattctgga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 atgagtggagcattttggggaacgcgggttatggagattgtgaagaagcacgattctgga 168

                                                                       
Query: 61  ggtctcgtttggaagagaatcaagctcactaccacccgcaaagccaatgctaagaagcgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 ggtctcgtttggaagagaatcaagctcactaccacccgcaaagccaatgctaagaagcgt 228

                                                                       
Query: 121 ctcctccgcgtttggcagaatgaagctgtcttgaaggcaacttctcaatcacctccttca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 ctcctccgcgtttggcagaatgaagctgtcttgaaggcaacttctcaatcacctccttca 288

                                                                    
Query: 181 atgagttcttctttcagtgccgacgaagctatcgacaatgctacaaagagtaattaa 237
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 atgagttcttctttcagtgccgacgaagctatcgacaatgctacaaagagtaattaa 345