Miyakogusa Predicted Gene

Lj0g3v0045259.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0045259.1 NODE_32633_length_2414_cov_36.706711.path2.1
         (1387 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58384 similar to UniRef100_Q7XJ98 Cluster: Xyloglucan...   151   1e-35
gnl|LJGI|TC75223 weakly similar to UniRef100_Q7XJ98 Cluster: Xyl...    94   3e-18

>gnl|LJGI|TC58384 similar to UniRef100_Q7XJ98 Cluster: Xyloglucan
           galactosyltransferase KATAMARI1; n=1; Arabidopsis
           thaliana|Rep: Xyloglucan galactosyltransferase KATAMARI1
           - Arabidopsis thaliana (Mouse-ear cress), partial (17%)
          Length = 822

 Score =  151 bits (76), Expect = 1e-35
 Identities = 158/184 (85%), Gaps = 1/184 (0%)
 Strand = Plus / Plus

                                                                       
Query: 359 ctgctgaaaataagagtgatccatgtggggggaggtatatttatgtgcatgatcttccgt 418
           |||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||| |
Sbjct: 639 ctgctgaaaacaagagtgatccatgtggtgggaggtatatttatgtacatgatcttcctt 698

                                                                       
Query: 419 cgaggtttaacgaggacatgttgaaggagt-gtaagagtttgagtctttggactaacatg 477
           | ||||| || ||||||||||||||||| | | ||||| |||||    ||||| ||||||
Sbjct: 699 ccaggttcaatgaggacatgttgaaggaatggcaagagcttgagcaagtggaccaacatg 758

                                                                       
Query: 478 tgtaagttcacaaccaatgctggccttgggccgccgcttgagaatgatgaaggggtgttc 537
           || |||||||||||||||||||| || || || || |||||||||  ||| ||||| |||
Sbjct: 759 tgcaagttcacaaccaatgctggtctcggtccacctcttgagaatattgatggggttttc 818

               
Query: 538 tctg 541
           ||||
Sbjct: 819 tctg 822


>gnl|LJGI|TC75223 weakly similar to UniRef100_Q7XJ98 Cluster: Xyloglucan
           galactosyltransferase KATAMARI1; n=1; Arabidopsis
           thaliana|Rep: Xyloglucan galactosyltransferase KATAMARI1
           - Arabidopsis thaliana (Mouse-ear cress), partial (11%)
          Length = 781

 Score = 93.7 bits (47), Expect = 3e-18
 Identities = 62/67 (92%)
 Strand = Plus / Plus

                                                                       
Query: 359 ctgctgaaaataagagtgatccatgtggggggaggtatatttatgtgcatgatcttccgt 418
           |||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||| |
Sbjct: 715 ctgctgaaaacaagagtgatccatgtggtgggaggtatatttatgtacatgatcttcctt 774

                  
Query: 419 cgaggtt 425
           | |||||
Sbjct: 775 ccaggtt 781