Miyakogusa Predicted Gene
- Lj0g3v0045059.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0045059.1 tr|B3VTL7|B3VTL7_MEDSA TIR-NBS-LRR RCT1-like
resistance protein OS=Medicago sativa PE=2 SV=1,74.09,0,NB-ARC,NB-ARC;
TIR,Toll/interleukin-1 receptor homology (TIR) domain; no
description,NULL; DISEASERS,CUFF.2185.1
(2058 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61438 weakly similar to UniRef100_A2Q6G5 Cluster: TIR... 428 e-119
gnl|LJGI|FS326053 weakly similar to UniRef100_A2Q6G5 Cluster: TI... 392 e-108
gnl|LJGI|DC592886 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ... 111 2e-23
gnl|LJGI|FS319481 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ... 101 2e-20
gnl|LJGI|FS322253 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ... 101 2e-20
gnl|LJGI|DC600124 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ... 96 1e-18
gnl|LJGI|TC81057 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA A... 94 4e-18
gnl|LJGI|AV406755 similar to UniRef100_A7Q7Z4 Cluster: Chromosom... 62 1e-08
gnl|LJGI|DC598457 weakly similar to UniRef100_A7PQ89 Cluster: Ch... 58 2e-07
>gnl|LJGI|TC61438 weakly similar to UniRef100_A2Q6G5 Cluster: TIR; n=1; Medicago
truncatula|Rep: TIR - Medicago truncatula (Barrel
medic), partial (33%)
Length = 751
Score = 428 bits (216), Expect = e-119
Identities = 321/356 (90%)
Strand = Plus / Plus
Query: 116 cgaggatccacgatgtgttcttgagtttcagaggggaagacactcgtgcttccttcactt 175
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cgagaatccacgatgtgttcttgagtttcagaggggaagacactcgtgcttccttcactt 444
Query: 176 cacatctctattccgctcttcaaaacgctgggatcaaagttttcagggacgacgattccc 235
||||||||||| ||||||||||||||||||| |||| |||||| |||||||||||||||
Sbjct: 445 cacatctctatgccgctcttcaaaacgctggagtcaacgttttccgggacgacgattccc 504
Query: 236 ttccaaggggagatcaaatttcatactcactgctgaaagcaattgaagaatctcagattt 295
|||||||||||||||||||| || | |||||| | |||||| ||| | ||| | ||||
Sbjct: 505 ttccaaggggagatcaaattacaaattcactgatcgcagcaatcgaacagtctgaaattt 564
Query: 296 cagttattgttttctcaccaaattatgcggattctcggtggtgtctggatgagttgaaca 355
| ||||| |||||||||||||||||||||||||| ||||||||| |||| |||||| |
Sbjct: 565 cggttatcgttttctcaccaaattatgcggattcgcggtggtgtatggaagagttggtga 624
Query: 356 aaataataaaatgtcacagaaccataggtcaggtggttctgccggtgttctacggtgtcg 415
||||||| | ||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 625 aaataatggactgtcacagaaccataggccaggtggttctgccggtgttctacggcgtcg 684
Query: 416 atccctctgaagtgcgacgccaaactggtgagtttgggaaaaaatttctcaatctt 471
|||||||||||||||| |||||||| |||||||||||||| ||||||| |||||||
Sbjct: 685 atccctctgaagtgcggcgccaaaccggtgagtttgggaagaaatttcacaatctt 740
>gnl|LJGI|FS326053 weakly similar to UniRef100_A2Q6G5 Cluster: TIR; n=1; Medicago
truncatula|Rep: TIR - Medicago truncatula (Barrel
medic), partial (31%)
Length = 695
Score = 392 bits (198), Expect = e-108
Identities = 306/342 (89%)
Strand = Plus / Plus
Query: 121 atccacgatgtgttcttgagtttcagaggggaagacactcgtgcttccttcacttcacat 180
||||| || ||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 324 atccatgaagtgttcttgagtttcagaggggaggatactcgtgcttccttcacttcacat 383
Query: 181 ctctattccgctcttcaaaacgctgggatcaaagttttcagggacgacgattcccttcca 240
|||||| |||||||||||||||| || |||| |||||||||||||||||||||||||||
Sbjct: 384 ctctatgccgctcttcaaaacgccggagtcaacgttttcagggacgacgattcccttcca 443
Query: 241 aggggagatcaaatttcatactcactgctgaaagcaattgaagaatctcagatttcagtt 300
||||||||||||||| || ||||||||| ||||||| ||||| |||||||| ||||||
Sbjct: 444 aggggagatcaaattacaagttcactgctgcaagcaatcgaagactctcagatctcagtt 503
Query: 301 attgttttctcaccaaattatgcggattctcggtggtgtctggatgagttgaacaaaata 360
|||||||||||| |||||||| |||| ||||||||| |||| |||||| ||||||
Sbjct: 504 attgttttctcaatcaattatgcaaattcgcggtggtgtatggaagagttggtgaaaata 563
Query: 361 ataaaatgtcacagaaccataggtcaggtggttctgccggtgttctacggtgtcgatccc 420
|| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 564 atggactgtcacagaaccataggccaggtggttctgccggtgttctacggtgtcgatccc 623
Query: 421 tctgaagtgcgacgccaaactggtgagtttgggaaaaaattt 462
||||||||||| |||||||||||||| ||||| || ||||||
Sbjct: 624 tctgaagtgcggcgccaaactggtgaatttggaaacaaattt 665
>gnl|LJGI|DC592886 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1; Medicago
truncatula|Rep: TIR; AAA ATPase - Medicago truncatula
(Barrel medic), partial (13%)
Length = 596
Score = 111 bits (56), Expect = 2e-23
Identities = 246/307 (80%), Gaps = 3/307 (0%)
Strand = Plus / Plus
Query: 1001 ttcttgtacttgacgatgtgaataaattggaccaactgaatgctttgtgtggaagtcgtg 1060
||||||| ||||| ||||| |||| ||||||||||||| | |||||||||||||| |||
Sbjct: 185 ttcttgtgcttgatgatgtcaatagattggaccaactggcttctttgtgtggaagttgtg 244
Query: 1061 agtggtttggttcagggagtagaataatcatcacaaccagagatcagcatatactgag-a 1119
| |||||||| ||| |||||||| |||||||||||||||||| | ||||| | || |
Sbjct: 245 aatggtttggccaaggaagtagaattatcatcacaaccagagatgaaaatatagtcagca 304
Query: 1120 ggg--agtagagttgaccaagtttacataatgaaagaaatggatgaaagagaatcgattg 1177
||| | ||||||| | || || | ||| |||||||||||||| | ||||| |||
Sbjct: 305 gggcatttggagttgagcttgtatatagaataaaagaaatggatgagaaggaatctcttg 364
Query: 1178 agctttttagttggaatgcattcaagcaagcgagccctaaggaagattttgctgaaattt 1237
|||||||||||||| ||||||| || ||| | | ||| |||| | |||||| |||
Sbjct: 365 agctttttagttggcatgcatttaaacaaccaattcctggagaaggctatgctgaccttt 424
Query: 1238 caagaaacgtagttgagtattctgggggattgccactagctcttcaagtccttgggtcct 1297
||||| | ||||||||||| | |||||||||||| |||||||||||||| | |||||||
Sbjct: 425 caagagatgtagttgagtactgtgggggattgccgctagctcttcaagtaatcgggtcct 484
Query: 1298 atttgtt 1304
||||||
Sbjct: 485 ttttgtt 491
>gnl|LJGI|FS319481 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1; Medicago
truncatula|Rep: TIR; AAA ATPase - Medicago truncatula
(Barrel medic), partial (16%)
Length = 710
Score = 101 bits (51), Expect = 2e-20
Identities = 99/115 (86%)
Strand = Plus / Plus
Query: 1766 aagcatttgagaagatgaagaaactcagattgcttcaacttgctggtgtaaagcttgaag 1825
||||||||| ||||||| | ||||| |||||||||||||||||||| | | | ||||| |
Sbjct: 512 aagcatttgggaagatggataaacttagattgcttcaacttgctggcgcacaacttgatg 571
Query: 1826 gagattttaaatatctttcaagaaatctgagatggctgtgttggcatggatttcc 1880
|||||| ||| |||||||||||| |||| |||||||| || |||||| |||||||
Sbjct: 572 gagattataagtatctttcaagagatcttagatggctttgctggcatagatttcc 626
Score = 89.7 bits (45), Expect = 6e-17
Identities = 90/105 (85%)
Strand = Plus / Plus
Query: 1503 ttttgcagaaattggaataagtgtccttgttgagagaagtcttgtaactgttgatgataa 1562
||||||||||||||||||||||||||| || | | | ||||||||| ||||| ||
Sbjct: 246 ttttgcagaaattggaataagtgtcctcgtacaacaatgccttgtaactattgataggaa 305
Query: 1563 gaacaagcttggaatgcatgatttgctgcgagacatgggaagaga 1607
||||||| | ||||||||||||||||| |||||||||||||||||
Sbjct: 306 gaacaagatcggaatgcatgatttgctacgagacatgggaagaga 350
>gnl|LJGI|FS322253 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1; Medicago
truncatula|Rep: TIR; AAA ATPase - Medicago truncatula
(Barrel medic), partial (11%)
Length = 680
Score = 101 bits (51), Expect = 2e-20
Identities = 99/115 (86%)
Strand = Plus / Plus
Query: 1766 aagcatttgagaagatgaagaaactcagattgcttcaacttgctggtgtaaagcttgaag 1825
||||||||| ||||||| | ||||| |||||||||||||||||||| | | | ||||| |
Sbjct: 428 aagcatttgggaagatggataaacttagattgcttcaacttgctggcgcacaacttgatg 487
Query: 1826 gagattttaaatatctttcaagaaatctgagatggctgtgttggcatggatttcc 1880
|||||| ||| |||||||||||| |||| |||||||| || |||||| |||||||
Sbjct: 488 gagattataagtatctttcaagagatcttagatggctttgctggcatagatttcc 542
Score = 73.8 bits (37), Expect = 4e-12
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 1543 cttgtaactgttgatgataagaacaagcttggaatgcatgatttgctgcgagacatggga 1602
||||||||| ||||| ||||||||| | ||||||||||||||||| ||||||||||||
Sbjct: 202 cttgtaactattgataggaagaacaagatcggaatgcatgatttgctacgagacatggga 261
Query: 1603 agaga 1607
|||||
Sbjct: 262 agaga 266
>gnl|LJGI|DC600124 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1; Medicago
truncatula|Rep: TIR; AAA ATPase - Medicago truncatula
(Barrel medic), partial (11%)
Length = 567
Score = 95.6 bits (48), Expect = 1e-18
Identities = 343/440 (77%), Gaps = 6/440 (1%)
Strand = Plus / Plus
Query: 1175 ttgagctttttagttggaatgcattcaagcaagcgagccctaaggaagattttgctgaaa 1234
||||||||||||||||| ||||||| ||| || | || || |||||| |||||||||
Sbjct: 108 ttgagctttttagttggcatgcatttaagaaaccaagtcccgaggaaggttttgctgatc 167
Query: 1235 tttcaagaaacgtagttgagtattctgggggattgccactagctcttcaagtccttgggt 1294
||||||| | |||||| | || | |||||| |||||||||||||||||||| ||||||
Sbjct: 168 tttcaagcgatgtagttaaatactgtggggggttgccactagctcttcaagtaattgggt 227
Query: 1295 cctatttgtt---tgatagggtcgtaacagaatggaagagtgtattggagaaactcagaa 1351
||| |||||| | ||| ||||||| |||||||||||| |||||||||||| ||
Sbjct: 228 cctttttgttgactaggaggagggtaacagtgtggaagagtgtactggagaaactcaaaa 287
Query: 1352 caattcccaatgaccaagtacagaaaaagttaagaataagctatgatggtttaaatgatg 1411
||||||||| | |||| | | ||| | |||||||| | ||| ||||||| |||||
Sbjct: 288 tgattcccaataaaaaagttatggagaagcttagaataagttttgacggtttaagtgatg 347
Query: 1412 ataaagagaaagatatattccttgacatagcttgtttcttaattgggatggacagaggtg 1471
|| | ||||| ||||||||||||||||| | ||||| ||||| ||||| || ||
Sbjct: 348 at---gttaaagaaatattccttgacatagcgttcttctttattggaatggaacaagatg 404
Query: 1472 atgctatacaaatattagatggctgcaaactttttgcagaaattggaataagtgtccttg 1531
|| ||| | |||||| ||| |||| | ||||||||||||||||||||||||||| |
Sbjct: 405 attttattgagatattaaatgactgcggtcattttgcagaaattggaataagtgtcctcg 464
Query: 1532 ttgagagaagtcttgtaactgttgatgataagaacaagcttggaatgcatgatttgctgc 1591
| | | | ||| ||||| ||||| ||||||| | | |||||||||||||||| |
Sbjct: 465 tacaacaatgccttataactattgataggaagaacaggatcagaatgcatgatttgctac 524
Query: 1592 gagacatgggaagagaaatc 1611
||||||||||| |||||||
Sbjct: 525 tagacatgggaaaagaaatc 544
>gnl|LJGI|TC81057 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1; Medicago
truncatula|Rep: TIR; AAA ATPase - Medicago truncatula
(Barrel medic), partial (8%)
Length = 1044
Score = 93.7 bits (47), Expect = 4e-18
Identities = 92/107 (85%)
Strand = Plus / Plus
Query: 1766 aagcatttgagaagatgaagaaactcagattgcttcaacttgctggtgtaaagcttgaag 1825
||||||||||||||||| | ||||| ||||||||||||||| |||| || || |||| |
Sbjct: 687 aagcatttgagaagatggataaacttagattgcttcaacttactggcgtgaaaattgatg 746
Query: 1826 gagattttaaatatctttcaagaaatctgagatggctgtgttggcat 1872
|||||| ||| |||||||||||| |||| |||||||| || ||||||
Sbjct: 747 gagattataagtatctttcaagagatcttagatggctttgctggcat 793
>gnl|LJGI|AV406755 similar to UniRef100_A7Q7Z4 Cluster: Chromosome chr18 scaffold_61,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_61, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (63%)
Length = 412
Score = 61.9 bits (31), Expect = 1e-08
Identities = 174/221 (78%), Gaps = 3/221 (1%)
Strand = Plus / Plus
Query: 127 gatgtgttcttgagtttcagaggggaagacactcgtgcttccttcacttcacatctctat 186
||||| ||||||||||||||||| || || ||||| || |||||||| |||||||||
Sbjct: 74 gatgtattcttgagtttcagaggagaggaatctcgtagatctttcacttctcatctctat 133
Query: 187 tccgctcttcaaaacgctgggatcaaagttttcagggacgacgattcccttccaagggga 246
| || | |||| ||||| ||||| ||||||| |||| |||| |||| |||||||
Sbjct: 134 acagcattgaaaaatgctggtatcaaggttttcatggacaacgag---cttcaaagggga 190
Query: 247 gatcaaatttcatactcactgctgaaagcaattgaagaatctcagatttcagttattgtt 306
|| | ||||||| |||||| | |||||||||||||| ||| ||| | ||||| ||
Sbjct: 191 gaagatatttcatcctcactattaaaagcaattgaagattctagaattgctattattatt 250
Query: 307 ttctcaccaaattatgcggattctcggtggtgtctggatga 347
|||||| ||||||| ||| |||| |||||||||||||||
Sbjct: 251 ttctcaacaaattacacgggttctaagtggtgtctggatga 291
>gnl|LJGI|DC598457 weakly similar to UniRef100_A7PQ89 Cluster: Chromosome chr18
scaffold_24, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_24, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (7%)
Length = 570
Score = 58.0 bits (29), Expect = 2e-07
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 1564 aacaagcttggaatgcatgatttgctgcgagacatgggaagagaa 1608
|||||||||| ||||||||||||| ||| ||| ||||||||||||
Sbjct: 210 aacaagcttgaaatgcatgatttggtgcaagagatgggaagagaa 254