Miyakogusa Predicted Gene
- Lj0g3v0044929.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0044929.1 tr|Q6XZH4|Q6XZH4_SOLTU Nematode resistance-like
protein (Fragment) OS=Solanum tuberosum GN=Gro1-10
P,38.76,0.000000000001,no description,NULL; SUBFAMILY NOT NAMED,NULL;
LEUCINE-RICH REPEAT-CONTAINING PROTEIN,NULL; seg,NULL,CUFF.2179.1
(892 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81057 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA A... 295 2e-79
gnl|LJGI|FS346368 weakly similar to UniRef100_A2Q6G3 Cluster: TI... 244 8e-64
gnl|LJGI|BP053556 131 8e-30
gnl|LJGI|DC595824 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ... 64 2e-09
gnl|LJGI|DC597742 similar to UniRef100_A2Q6C2 Cluster: TIR; n=1;... 56 4e-07
gnl|LJGI|DC594433 weakly similar to UniRef100_A2Q6G3 Cluster: TI... 54 2e-06
>gnl|LJGI|TC81057 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1; Medicago
truncatula|Rep: TIR; AAA ATPase - Medicago truncatula
(Barrel medic), partial (8%)
Length = 1044
Score = 295 bits (149), Expect = 2e-79
Identities = 149/149 (100%)
Strand = Plus / Plus
Query: 1 atgctgaagaagctcaagtttctgaatcttagtcattctcctaacttgagacaaactcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896 atgctgaagaagctcaagtttctgaatcttagtcattctcctaacttgagacaaactcca 955
Query: 61 gacttttcagacttaccaaatcttgaaaagctagtactgaaaggttgtactagtttgtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 956 gacttttcagacttaccaaatcttgaaaagctagtactgaaaggttgtactagtttgtct 1015
Query: 121 ttgatttctcatactattggaaatctcaa 149
|||||||||||||||||||||||||||||
Sbjct: 1016 ttgatttctcatactattggaaatctcaa 1044
>gnl|LJGI|FS346368 weakly similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1;
Medicago truncatula|Rep: TIR; AAA ATPase - Medicago
truncatula (Barrel medic), partial (5%)
Length = 694
Score = 244 bits (123), Expect = 8e-64
Identities = 246/287 (85%)
Strand = Plus / Minus
Query: 505 ttggatgaagaaaaaagtagatcctatggtctattacatgctcttaaagatctttccaag 564
||||||||| | || ||||| | ||||||||||||| ||||||| |||||| || |||
Sbjct: 652 ttggatgaacagaacagtagtttctatggtctattatatgctctaaaagatattcagaag 593
Query: 565 cttcaacgcctttgggtgaagtgcgactcagaagttcagctgaatcaaagtgtagaaata 624
||||||||||| ||||||||||| |||||||| |||||||||||||||||| |||| |
Sbjct: 592 cttcaacgcctatgggtgaagtgtgactcagatgttcagctgaatcaaagtatagagagg 533
Query: 625 attttggatacactaaaaaccacaaattttggggaattagaaggaacaccaagcacatct 684
||||||||||| |||| ||||||| || |||||||||||||| ||| ||||||||||||
Sbjct: 532 attttggataccttaaataccacaatttgtggggaattagaagcaaccccaagcacatct 473
Query: 685 catgtctcaaacaatagttctgctttaattgattgtcacagccaagttcgcatatcaggg 744
|| |||||| ||||| || ||||| ||||||| |||| |||||||||||| ||| ||
Sbjct: 472 caagtctcagccaataagtccactttagttgattggcacaaccaagttcgcatttcaagg 413
Query: 745 tcaaaaaattccttgacttctcttttgatacaaatgggaatgaactg 791
|||||||| || ||||| |||||| ||||||||||||||||||||||
Sbjct: 412 tcaaaaaaatcattgacatctcttctgatacaaatgggaatgaactg 366
>gnl|LJGI|BP053556
Length = 522
Score = 131 bits (66), Expect = 8e-30
Identities = 140/165 (84%)
Strand = Plus / Minus
Query: 625 attttggatacactaaaaaccacaaattttggggaattagaaggaacaccaagcacatct 684
||||||||||| |||| ||||||| || |||||||||||||| ||| ||||||||||||
Sbjct: 508 attttggataccttaaataccacaatttgtggggaattagaagcaaccccaagcacatct 449
Query: 685 catgtctcaaacaatagttctgctttaattgattgtcacagccaagttcgcatatcaggg 744
|| |||||| | ||| || ||||| ||||||| |||| |||||||||||| ||| ||
Sbjct: 448 caagtctcagccnataagtccactttagttgattggcacaaccaagttcgcatttcaagg 389
Query: 745 tcaaaaaattccttgacttctcttttgatacaaatgggaatgaac 789
|||||||| || ||||| |||||| ||||||||| ||||||||||
Sbjct: 388 tcaaaaaaatcattgacatctcttctgatacaaacgggaatgaac 344
>gnl|LJGI|DC595824 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1; Medicago
truncatula|Rep: TIR; AAA ATPase - Medicago truncatula
(Barrel medic), partial (5%)
Length = 575
Score = 63.9 bits (32), Expect = 2e-09
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 380 ctttgtgcggctatgaagggttctcacgtgatgtatttccatcaattatacagtcttgga 439
||||||||||| ||||||| |||||||||||||| ||||| || || || ||||||||
Sbjct: 1 ctttgtgcggccatgaaggattctcacgtgatgtgtttccttctatcatttggtcttgga 60
Query: 440 tgtctccaactaataa 455
|||| ||||| |||||
Sbjct: 61 tgtcaccaacaaataa 76
Score = 52.0 bits (26), Expect = 6e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 775 caaatgggaatgaactgtcatgtcaccaatattctcaaagaaatcattttacag 828
|||||||||||||| |||| || ||||| |||||| ||||| | ||||||||||
Sbjct: 402 caaatgggaatgaattgtcttgccaccagtattctgaaagagagcattttacag 455
>gnl|LJGI|DC597742 similar to UniRef100_A2Q6C2 Cluster: TIR; n=1; Medicago
truncatula|Rep: TIR - Medicago truncatula (Barrel
medic), partial (16%)
Length = 590
Score = 56.0 bits (28), Expect = 4e-07
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 208 atctataagttgaagtcgttaaaaactctcattttgtctggatgttcaaaaattgacaag 267
|||||| ||||||| || || | ||||||||| | || || |||||||||||||| |||
Sbjct: 5 atctatcagttgaaatctttgacaactctcatcctttcaggttgttcaaaaattgataag 64
Query: 268 ttggaagaggatatag 283
|||||||| |||||||
Sbjct: 65 ttggaagaagatatag 80
>gnl|LJGI|DC594433 weakly similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1;
Medicago truncatula|Rep: TIR; AAA ATPase - Medicago
truncatula (Barrel medic), partial (11%)
Length = 581
Score = 54.0 bits (27), Expect = 2e-06
Identities = 72/87 (82%)
Strand = Plus / Plus
Query: 739 tcagggtcaaaaaattccttgacttctcttttgatacaaatgggaatgaactgtcatgtc 798
||||| |||||| ||||||||| |||||||| | |||||||||||||| || || | |
Sbjct: 70 tcaggatcaaaagattccttgaaatctcttttatttcaaatgggaatgaattgccaagcc 129
Query: 799 accaatattctcaaagaaatcatttta 825
|||| |||||| ||||| | |||||||
Sbjct: 130 accagtattctgaaagagagcatttta 156