Miyakogusa Predicted Gene
- Lj0g3v0043789.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0043789.1 Non Chatacterized Hit- tr|A5ATC1|A5ATC1_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,68.01,0,seg,NULL; ZF_RING_2,Zinc finger, RING-type;
coiled-coil,NULL; zf-RING_2,Zinc finger, RING-type; OS01,CUFF.2027.1
(1108 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71555 similar to UniRef100_A7PD41 Cluster: Chromosome... 2139 0.0
gnl|LJGI|GO008986 similar to UniRef100_A7PD41 Cluster: Chromosom... 775 0.0
gnl|LJGI|FS334891 weakly similar to UniRef100_A7PD41 Cluster: Ch... 109 4e-23
gnl|LJGI|FS361418 similar to UniRef100_A7Q2E7 Cluster: Chromosom... 103 2e-21
gnl|LJGI|TC63161 similar to UniRef100_A7PD41 Cluster: Chromosome... 54 2e-06
gnl|LJGI|TC78801 similar to UniRef100_A7PC80 Cluster: Chromosome... 52 8e-06
>gnl|LJGI|TC71555 similar to UniRef100_A7PD41 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (59%)
Length = 1842
Score = 2139 bits (1079), Expect = 0.0
Identities = 1099/1108 (99%)
Strand = Plus / Plus
Query: 1 atgccagaaagcatgtctctttatcatacccatttgaaaatggcatggattcagcatcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 atgccagaaagcatgtctctttatcatacccatttgaaaatggcatggattcagcatcaa 616
Query: 61 atccaacaaaaagatgcttcatcttcatcgccaaatccgggtcatttcgataaacaatcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 atccaacaaaaagatgcttcatcttcatcgccaaatccgggtcatttcgataaacaatcg 676
Query: 121 tcagcaccctcagcttcatcatcgggtgctcgaattagtcctgcagttcttttcgtcata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tcagcaccctcagcttcatcatcgggtgctcgaattagtcctgcagttcttttcgtcata 736
Query: 181 gtgattctggctgttctgtttttcatttcgggtttgctccacctgcttgttaggtttctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 gtgattctggctgttctgtttttcatttcgggtttgctccacctgcttgttaggtttctc 796
Query: 241 acaaagaagaacccatcttcacaatctgataggcaccgcgaaatttctaactctgatgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 acaaagaagaacccatcttcacaatctgataggcaccgcgaaatttctaactctgatgct 856
Query: 301 cttgaaagacagctgcaacagcttttccatctccatgactttggtttggaccaagctttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 cttgaaagacagctgcaacagcttttccatctccatgactttggtttggaccaagctttc 916
Query: 361 attgatgcacttcctgttttccagtataaagagataacggggctgaaggagcccttagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 attgatgcacttcctgttttccagtataaagagataacggggctgaaggagcccttagat 976
Query: 421 tgtgctgtttgtctttgcgagttttccgaaaaggataatctcaggttgctccctgtgtgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977 tgtgctgtttgtctttgcgagttttccgaaaaggataatctcaggttgctccctgtgtgc 1036
Query: 481 agccatgcttttcatatcaattgtatagatacatggcttttgtcaaactcaacatgccca 540
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1037 agccatgctcttcatatcaattgtatagatacatggcttttgtcaaactcaacatgccca 1096
Query: 541 ctttgtaggggaacactccttggcctcgctgctggcttttcggtcgaaaatccaatattt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1097 ctttgtaggggaacactccttggcctcgctgctggcttttcggtcgaaaatccaatattt 1156
Query: 601 gattatgatgatttgagggatgatgagggctgctatggggaaaatgaattccgtaatagn 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1157 gattatgatgatttgagggatgatgagggctgctatggggaaaatgaattccgtaataga 1216
Query: 661 nnnnnntcagttgaaattcaagacattgtagaaaaggggattttccctgtaaggcttggg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1217 aaaaaatcagttgaaattcaagacattgtagaaaaggggattttccctgtaaggcttggg 1276
Query: 721 aaatttagaaggctggatgtggaggcagtggagactataggaggagagactagtagcagt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1277 aaatttagaaggctggatgtggaggcagtggagactataggaggagagactagtagcagt 1336
Query: 781 aatttggatgcaagaagatgttactcaatgggatcttaccaatatgtccttggcaaatca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1337 aatttggatgcaagaagatgttactcaatgggatcttaccaatatgtccttggcaaatca 1396
Query: 841 gacttgcggataaccttgaacaatgaccgaaaaagttgcgatgctaagctcaagaaagaa 900
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1397 gacttgcagataaccttgaacaatgaccgaaaaagttgcgatgctaagctcaagaaagaa 1456
Query: 901 agcgaaaacttggagaaactttctgttgagggtgatattgaagcaaagaagattagaaga 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1457 agcgaaaacttggagaaactttctgttgagggtgatattgaagcaaagaagattagaaga 1516
Query: 961 gttggtaaaggtgagagctattctgtttccaaaatctggttgtggtcagagaagggcaaa 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1517 gttggtaaaggtgagagctattctgtttccaaaatctggttgtggtcagagaagggcaaa 1576
Query: 1021 ttttcagtttcttctgatgctggaatgggcatgccatcttctcttaatgcagaattgcca 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1577 ttttcagtttcttctgatgctggaatgggcatgccatcttctcttaatgcagaattgcca 1636
Query: 1081 tggatgagggaaacagaagggtcatgaa 1108
||||||||||||||||||||||||||||
Sbjct: 1637 tggatgagggaaacagaagggtcatgaa 1664
>gnl|LJGI|GO008986 similar to UniRef100_A7PD41 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 675
Score = 775 bits (391), Expect = 0.0
Identities = 394/395 (99%)
Strand = Plus / Plus
Query: 1 atgccagaaagcatgtctctttatcatacccatttgaaaatggcatggattcagcatcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 atgccagaaagcatgtctctttatcatacccatttgaaaatggcatggattcagcatcaa 340
Query: 61 atccaacaaaaagatgcttcatcttcatcgccaaatccgggtcatttcgataaacaatcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 atccaacaaaaagatgcttcatcttcatcgccaaatccgggtcatttcgataaacaatcg 400
Query: 121 tcagcaccctcagcttcatcatcgggtgctcgaattagtcctgcagttcttttcgtcata 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tcagcaccctcagctccatcatcgggtgctcgaattagtcctgcagttcttttcgtcata 460
Query: 181 gtgattctggctgttctgtttttcatttcgggtttgctccacctgcttgttaggtttctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gtgattctggctgttctgtttttcatttcgggtttgctccacctgcttgttaggtttctc 520
Query: 241 acaaagaagaacccatcttcacaatctgataggcaccgcgaaatttctaactctgatgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 acaaagaagaacccatcttcacaatctgataggcaccgcgaaatttctaactctgatgct 580
Query: 301 cttgaaagacagctgcaacagcttttccatctccatgactttggtttggaccaagctttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 cttgaaagacagctgcaacagcttttccatctccatgactttggtttggaccaagctttc 640
Query: 361 attgatgcacttcctgttttccagtataaagagat 395
|||||||||||||||||||||||||||||||||||
Sbjct: 641 attgatgcacttcctgttttccagtataaagagat 675
>gnl|LJGI|FS334891 weakly similar to UniRef100_A7PD41 Cluster: Chromosome chr17
scaffold_12, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_12, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 794
Score = 109 bits (55), Expect = 4e-23
Identities = 85/95 (89%)
Strand = Plus / Plus
Query: 152 gaattagtcctgcagttcttttcgtcatagtgattctggctgttctgtttttcatttcgg 211
|||||||||| || ||||||||| |||||||| || |||||||||||||||||||||| |
Sbjct: 592 gaattagtccagctgttcttttcatcatagtggttttggctgttctgtttttcatttctg 651
Query: 212 gtttgctccacctgcttgttaggtttctcacaaag 246
|| ||||||||||||||||||| || |||| ||||
Sbjct: 652 gtctgctccacctgcttgttagattcctcataaag 686
>gnl|LJGI|FS361418 similar to UniRef100_A7Q2E7 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 757
Score = 103 bits (52), Expect = 2e-21
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 763 ggagagactagtagcagtaatttggatgcaagaagatgttactcaatgggatcttaccaa 822
||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 475 ggagaaacaagtagcagtaatttggatgcaagaaggtgttactcaatgggatcttaccag 416
Query: 823 tatgtccttggcaaatcaga 842
||||| ||||||| |||||
Sbjct: 415 tatgtggttggcaattcaga 396
Score = 79.8 bits (40), Expect = 3e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 487 gcttttcatatcaattgtatagatacatggcttttgtcaaactcaacatgcccactttgt 546
||||||||||||| |||||| ||||| ||||||||||||||||| || ||||| ||||||
Sbjct: 757 gcttttcatatcagttgtattgatacctggcttttgtcaaactccacttgccctctttgt 698
Query: 547 aggggaac 554
|| |||||
Sbjct: 697 agaggaac 690
Score = 75.8 bits (38), Expect = 5e-13
Identities = 83/98 (84%)
Strand = Plus / Minus
Query: 919 ctttctgttgagggtgatattgaagcaaagaagattagaagagttggtaaaggtgagagc 978
||||| || ||||| ||||| || |||||||||||||| || || |||||||||| |||
Sbjct: 337 ctttcagtggagggggatatggaggcaaagaagattagtagtgtcagtaaaggtgacagc 278
Query: 979 tattctgtttccaaaatctggttgtggtcagagaaggg 1016
| |||| | |||||||||||||||||| || |||||||
Sbjct: 277 ttttctatctccaaaatctggttgtggccaaagaaggg 240
>gnl|LJGI|TC63161 similar to UniRef100_A7PD41 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (60%)
Length = 1033
Score = 54.0 bits (27), Expect = 2e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 779 gtaatttggatgcaagaagatgttactcaatgggatctt 817
|||||||||||||||||||||| || |||||||| ||||
Sbjct: 694 gtaatttggatgcaagaagatgctattcaatgggttctt 732
>gnl|LJGI|TC78801 similar to UniRef100_A7PC80 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (66%)
Length = 1145
Score = 52.0 bits (26), Expect = 8e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 477 gtgcagccatgcttttcatatcaattgtatagatacatggct 518
||||||||||||||||||| ||||||| || || ||||||||
Sbjct: 497 gtgcagccatgcttttcatctcaattgcattgacacatggct 538