Miyakogusa Predicted Gene

Lj0g3v0043099.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0043099.1 Non Chatacterized Hit- tr|I1LU37|I1LU37_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,77.37,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
Cellulose_synt,Cellulose
synthase,NODE_6534_length_490_cov_48.185715.path1.1
         (426 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV410881 weakly similar to UniRef100_Q2HT16 Cluster: Ce...   113   9e-25

>gnl|LJGI|AV410881 weakly similar to UniRef100_Q2HT16 Cluster: Cellulose synthase;
           n=1; Medicago truncatula|Rep: Cellulose synthase -
           Medicago truncatula (Barrel medic), partial (17%)
          Length = 434

 Score =  113 bits (57), Expect = 9e-25
 Identities = 111/129 (86%)
 Strand = Plus / Plus

                                                                       
Query: 298 cttccaccagtggatttgtatgtgacaacagcagatcctgtacttgaaccaccactcatc 357
           ||||||||||||||  ||| |||||||||||||||| |||  |||||||||||| |  | 
Sbjct: 283 cttccaccagtggacatgtttgtgacaacagcagatgctgaccttgaaccaccaattctg 342

                                                                       
Query: 358 actatgaacactgtgctttctcttttggcacttgattatccagctaacaagctagcttgc 417
           ||  ||||||||||| | ||||| ||||||||||||||||||||| | ||||||||||| 
Sbjct: 343 acagtgaacactgtgttgtctctgttggcacttgattatccagctcagaagctagcttgt 402

                    
Query: 418 tatgtttct 426
           |||||||||
Sbjct: 403 tatgtttct 411