Miyakogusa Predicted Gene

Lj0g3v0042849.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0042849.1 tr|Q6K7X5|Q6K7X5_ORYSJ Os02g0615300 protein
OS=Oryza sativa subsp. japonica GN=P0407A09.23 PE=4
SV=1,44,0.0000001,no description,NULL; L domain-like,NULL;
LRRNT_2,Leucine-rich repeat-containing N-terminal, type 2;
,CUFF.1994.1
         (482 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS326600                                                      82   4e-15
gnl|LJGI|FS319800 weakly similar to UniRef100_A7Q3E6 Cluster: Ch...    58   5e-08

>gnl|LJGI|FS326600 
          Length = 271

 Score = 81.8 bits (41), Expect = 4e-15
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                       
Query: 157 ccatatggaattctagattcttggaatcattctacccacttttgcatgtggcatggaatt 216
           ||||||||||| |||||||||||||||  |||||| ||||| |||| |||||||||||| 
Sbjct: 191 ccatatggaatcctagattcttggaatgcttctacacacttctgcaagtggcatggaatc 250

                    
Query: 217 acatgcagc 225
           |||||||||
Sbjct: 251 acatgcagc 259


>gnl|LJGI|FS319800 weakly similar to UniRef100_A7Q3E6 Cluster: Chromosome chr13
           scaffold_48, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr13 scaffold_48, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (5%)
          Length = 246

 Score = 58.0 bits (29), Expect = 5e-08
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                       
Query: 157 ccatatggaattctagattcttggaatcattctacccacttttgcatgtggcatggaatt 216
           ||||||||||| |||||||||||||||   || |||||||| |||| |||| ||||| | 
Sbjct: 158 ccatatggaatcctagattcttggaatagctcaacccacttctgcaagtggtatggagtc 217

                    
Query: 217 acatgcagc 225
           |||||||||
Sbjct: 218 acatgcagc 226