Miyakogusa Predicted Gene
- Lj0g3v0042719.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0042719.1 Non Chatacterized Hit- tr|C6T2R2|C6T2R2_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,89.08,0,ZF_RING_2,Zinc finger, RING-type; seg,NULL; no
description,Zinc finger, RING/FYVE/PHD-type;
zf-rbx1,,NODE_31641_length_677_cov_60.376663.path1.1
(363 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67367 homologue to UniRef100_Q2PYP4 Cluster: RING-box... 720 0.0
gnl|LJGI|TC65492 UniRef100_Q2PYP4 Cluster: RING-box protein; n=1... 387 e-107
gnl|LJGI|TC60612 homologue to UniRef100_Q2PYP4 Cluster: RING-box... 345 1e-94
>gnl|LJGI|TC67367 homologue to UniRef100_Q2PYP4 Cluster: RING-box protein; n=1;
Arachis hypogaea|Rep: RING-box protein - Arachis
hypogaea (Peanut), partial (98%)
Length = 696
Score = 720 bits (363), Expect = 0.0
Identities = 363/363 (100%)
Strand = Plus / Plus
Query: 1 atggcgactctggattccgacgtgcaaatggttcccgccgacgatccctccgccgccggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atggcgactctggattccgacgtgcaaatggttcccgccgacgatccctccgccgccggc 120
Query: 61 gccggtccttcttcttcttccaagaaacccaagcgcttcgagatcaagaagtggaacgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gccggtccttcttcttcttccaagaaacccaagcgcttcgagatcaagaagtggaacgcc 180
Query: 121 gttgctctctgggcttgggacatcgttgtcgataactgtgctatctgccgaaaccacatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gttgctctctgggcttgggacatcgttgtcgataactgtgctatctgccgaaaccacatc 240
Query: 181 atggatcgctgtattgagtgtcaggccaatcaggctagctccactgctgatgagtgcact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atggatcgctgtattgagtgtcaggccaatcaggctagctccactgctgatgagtgcact 300
Query: 241 gttgcttggggtgtttgtaaccatgcttttcattttcattgcattagccgatggctcaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gttgcttggggtgtttgtaaccatgcttttcattttcattgcattagccgatggctcaag 360
Query: 301 acccgtcaagtatgtcctctagataacagtgagtgggagtttcagaaatacggtcactag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acccgtcaagtatgtcctctagataacagtgagtgggagtttcagaaatacggtcactag 420
Query: 361 aac 363
|||
Sbjct: 421 aac 423
>gnl|LJGI|TC65492 UniRef100_Q2PYP4 Cluster: RING-box protein; n=1; Arachis
hypogaea|Rep: RING-box protein - Arachis hypogaea
(Peanut), complete
Length = 688
Score = 387 bits (195), Expect = e-107
Identities = 319/360 (88%), Gaps = 9/360 (2%)
Strand = Plus / Plus
Query: 4 gcgactctggattccgacgtgcaaatggttcccgccgacgatccctccgccgccggcgcc 63
|||||||||||||||||||| | |||||||||||||| ||| |||||| | |||||
Sbjct: 48 gcgactctggattccgacgttccaatggttcccgccggcgaaccctccagca---gcgcc 104
Query: 64 ggtccttcttcttcttccaagaaacccaagcgcttcgagatcaagaagtggaacgccgtt 123
|| ||||| || |||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 105 ggcccttcctc------caagaagcccaagcgcttcgaaatcaagaagtggaacgccgtt 158
Query: 124 gctctctgggcttgggacatcgttgtcgataactgtgctatctgccgaaaccacatcatg 183
||||||||||||||||| || ||||| |||||||||||||| ||||| ||||| ||||||
Sbjct: 159 gctctctgggcttgggatattgttgttgataactgtgctatttgccggaaccatatcatg 218
Query: 184 gatcgctgtattgagtgtcaggccaatcaggctagctccactgctgatgagtgcactgtt 243
|||| |||||||||||| ||||| || ||||||||| | ||| || || |||||||||
Sbjct: 219 gatctctgtattgagtgccaggctaaccaggctagcgctactagcgaggaatgcactgtt 278
Query: 244 gcttggggtgtttgtaaccatgcttttcattttcattgcattagccgatggctcaagacc 303
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 279 gcttggggtgtttgtaaccatgcttttcattttcattgcataagccgttggctcaagacc 338
Query: 304 cgtcaagtatgtcctctagataacagtgagtgggagtttcagaaatacggtcactagaac 363
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 339 cgtcaagtgtgtcctctagataacagtgagtgggagttccagaaatacggtcactagaac 398
>gnl|LJGI|TC60612 homologue to UniRef100_Q2PYP4 Cluster: RING-box protein; n=1;
Arachis hypogaea|Rep: RING-box protein - Arachis
hypogaea (Peanut), partial (98%)
Length = 766
Score = 345 bits (174), Expect = 1e-94
Identities = 261/290 (90%)
Strand = Plus / Plus
Query: 74 cttcttccaagaaacccaagcgcttcgagatcaagaagtggaacgccgttgctctctggg 133
||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 148 cttcttccaagaagtccaaacgcttcgagatcaagaagtggaacgccgtcgctctctggg 207
Query: 134 cttgggacatcgttgtcgataactgtgctatctgccgaaaccacatcatggatcgctgta 193
|||||||||| || || |||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 208 cttgggacattgtcgttgataactgtgctatctgccgcaaccacatcatggatctctgta 267
Query: 194 ttgagtgtcaggccaatcaggctagctccactgctgatgagtgcactgttgcttggggtg 253
| ||||| || || || ||||||||| | ||| || || |||||||| |||||||| |
Sbjct: 268 tagagtgccaagctaaccaggctagcccaactagcgaagaatgcactgtggcttgggggg 327
Query: 254 tttgtaaccatgcttttcattttcattgcattagccgatggctcaagacccgtcaagtat 313
||||||||||||||||||| || ||||||||||| ||||||||||||||||| |||||||
Sbjct: 328 tttgtaaccatgcttttcacttccattgcattagtcgatggctcaagacccgccaagtat 387
Query: 314 gtcctctagataacagtgagtgggagtttcagaaatacggtcactagaac 363
||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 388 gtcctctagataacagtgagtgggagtttcagaaatatggccactagaac 437