Miyakogusa Predicted Gene
- Lj0g3v0041269.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0041269.1 tr|G7J986|G7J986_MEDTR Chromo domain-containing
protein LHP1 OS=Medicago truncatula GN=MTR_3g118260
,67.27,2e-16,Chromo domain-like,Chromo domain-like; seg,NULL;
Chromatin organization modifier domain,Chromo domai,CUFF.1925.1
(1293 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68033 similar to UniRef100_A7M6G1 Cluster: Terminal f... 1465 0.0
gnl|LJGI|TC72137 similar to UniRef100_Q946J8 Cluster: Chromo dom... 749 0.0
>gnl|LJGI|TC68033 similar to UniRef100_A7M6G1 Cluster: Terminal flower 2 protein; n=1;
Malus x domestica|Rep: Terminal flower 2 protein - Malus
domestica (Apple) (Malus sylvestris), partial (19%)
Length = 994
Score = 1465 bits (739), Expect = 0.0
Identities = 745/747 (99%)
Strand = Plus / Plus
Query: 547 cacacacagtctgcccctctcaacgatattagtattcctgatattcctgcctttccccag 606
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cacatacagtctgcccctctcaacgatattagtattcctgatattcctgcctttccccag 61
Query: 607 actgtgctttttgcggatgaagttgaaaataatggtgatgccagcagtctcggaaactct 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 actgtgctttttgcggatgaagttgaaaataatggtgatgccagcagtctcggaaactct 121
Query: 667 aatcatgctcatggtaataggtctgccgatgctccagaagcagttgttgaaaggaatgag 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aatcatgctcatggtaataggtctgccgatgctccagaagcagttgttgaaaggaatgag 181
Query: 727 gaaaatgattatgatcctaagcttagcgaacttagagctacgaccaccaacgggtatgaa 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gaaaatgattatgatcctaagcttagcgaacttagagctacgaccaccaacgggtatgaa 241
Query: 787 ggagaaaacctcgcaacacagtttcaagaaactcaacattcagtaggaactcgtcatgtt 846
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 242 ggagaaaacctcgcaacacagtttcaagaaactcaacattcagtaggaactcttcatgtt 301
Query: 847 gatggtcaactaaatggggattgcacagaacctggtcaaagtggccgctgcagaggagct 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gatggtcaactaaatggggattgcacagaacctggtcaaagtggccgctgcagaggagct 361
Query: 907 aaacggagaaaatctggttctgttaagaggttcaatagagattcatatgctggtgacgaa 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aaacggagaaaatctggttctgttaagaggttcaatagagattcatatgctggtgacgaa 421
Query: 967 cccgttaatactcaaagaccagttgacgtatctgctgttacaactgaacaagtacaaaca 1026
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 cccgttaatactcaaagaccagttgacgtatctgctgttacaactgaacaagtacaaaca 481
Query: 1027 ggggctgctgataatgcgggtccaaatggccataagaggacgaatcacgctagacctgcc 1086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ggggctgctgataatgcgggtccaaatggccataagaggacgaatcacgctagacctgcc 541
Query: 1087 tgcactattgtcaagattattaagccagtacgctattcagctgcagtagctagcagcatg 1146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tgcactattgtcaagattattaagccagtacgctattcagctgcagtagctagcagcatg 601
Query: 1147 caggatgcttcagtaaccttcgtcgctttgaggtcggatggaacagaagtgttggttgat 1206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 caggatgcttcagtaaccttcgtcgctttgaggtcggatggaacagaagtgttggttgat 661
Query: 1207 aacacatatctcaaggcatactatcccattctgctaatcaattactacgagcagcatctc 1266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 aacacatatctcaaggcatactatcccattctgctaatcaattactacgagcagcatctc 721
Query: 1267 cgctacactcctgaacattactgaaca 1293
|||||||||||||||||||||||||||
Sbjct: 722 cgctacactcctgaacattactgaaca 748
>gnl|LJGI|TC72137 similar to UniRef100_Q946J8 Cluster: Chromo domain-containing
protein LHP1; n=2; Arabidopsis thaliana|Rep: Chromo
domain-containing protein LHP1 - Arabidopsis thaliana
(Mouse-ear cress), partial (19%)
Length = 790
Score = 749 bits (378), Expect = 0.0
Identities = 408/414 (98%), Gaps = 3/414 (0%)
Strand = Plus / Plus
Query: 204 catgcagatcgggttgcagtgtctggaccgggaaagggtcccattctccgtgaaaggttt 263
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 377 catgcagatcgggttgcagtgtctggaccgggaaagggtcccattctccgtgaa-ggttt 435
Query: 264 ctatgaagttgaagctatacgtcgtaagaggattcgtaggggtcagccgcagtacttaat 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ctatgaagttgaagctatacgtcgtaagaggattcgtaggggtcagccgcagtacttaat 495
Query: 324 caaatggcgtgattggtcagagggatccaatacttgggagcctctagaaaatcttgcgag 383
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 496 caaatggcgtgattggtcagagggatccaatacttgggaacctctagaaaatcttgcgag 555
Query: 384 tgttcctgatgttgttgctgctttcgaggctagcttgagatcagcaaagagaaagcgcaa 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tgttcctgatgttgttgctgctttcgaggctagcttgagatcagcaaagagaaagcgcaa 615
Query: 444 acgcaagcatgcggttcatcacattcagcctaagaagaggctggagcgttctgccactcc 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 acgcaagcatgcggttcatcacattcagcctaagaagaggctggagcgttctgccactcc 675
Query: 504 ttacagcctcagacaatttccggcaaatacacctgacaaccaccacacacagtctgcccc 563
|| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct: 676 ttccagcctcagacaatttccggcaaatacacccgacaaccaccacacacagtctg-ccc 734
Query: 564 tctcaacgatattagtattcctgatattcctgcctttccccagactgtgctttt 617
||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 735 tctcaacgatattagtattcctgatattcctgccttt-cccagactgtgctttt 787
Score = 157 bits (79), Expect = 2e-37
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 50 gtatgctgcagatggtgcttcttttgctgaaggagagcatacccagttgcagaaagggga 109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 gtatgctgcagatggtgcttcttttgctgaaggagagcatacccagttgcagaaagggga 282
Query: 110 agcggagcaaccccgtgtg 128
|||||||||||||||||||
Sbjct: 283 agcggagcaaccccgtgtg 301