Miyakogusa Predicted Gene
- Lj0g3v0039969.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0039969.1 Non Chatacterized Hit- tr|I1L5K1|I1L5K1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2929
PE=,63.09,0,SEC31,NULL; SEC31-RELATED PROTEIN,NULL; no
description,WD40/YVTN repeat-like-containing domain; WD_R,CUFF.1820.1
(1275 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66425 similar to UniRef100_A7Q204 Cluster: Chromosome... 396 e-109
>gnl|LJGI|TC66425 similar to UniRef100_A7Q204 Cluster: Chromosome chr13 scaffold_45,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_45, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 1095
Score = 396 bits (200), Expect = e-109
Identities = 342/388 (88%), Gaps = 6/388 (1%)
Strand = Plus / Plus
Query: 444 ctctgcttcccaaggggaaatttcattcttatcttggaatagtcaagtgcagcacatatt 503
||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||
Sbjct: 634 ctctgcttcccaaggggaaatttcatttttatcttggaatagcaaagtgcaacacatatt 693
Query: 504 agcatctacttcatatgatgggaccatggtggtatgggacacaaagaatctaaagcaagt 563
|||||||||||||||| ||||||||| ||||| |||||| |||||| | ||| | |||
Sbjct: 694 agcatctacttcatataatgggaccactgtggtctgggacctaaagaagcaaaaaccagt 753
Query: 564 gataagcttcgcagattcagttagaaggcggtgctcaattttgcaatggaatcctgatat 623
||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 754 gataagctttgcagattcagttagaaggcggtgctcagttttgcaatggaatcctgatat 813
Query: 624 tcctacacagcttataattgcatc---tgaagatgactctc---ctttaaggctttggga 677
| ||||||| ||| || ||||||| |||||||| ||| | ||||||||||||||||
Sbjct: 814 tgctacacaacttgtagttgcatctgatgaagatggctcgccctctttaaggctttggga 873
Query: 678 cttgaggtttaccatggcaccgataatggagtttgtggggcacactagaggtgtaatagg 737
||||| || || ||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 874 tatgaggaatataataacaccgataaaggagtttgtgggacacactagaggtgtaatagc 933
Query: 738 aatgacatggtgtcctaatgatggcgcttctttgcttacctgtggcaaagatagccggac 797
|||| |||||||||| |||||| || ||| ||||||||||||||||||||||||||| ||
Sbjct: 934 aatgtcatggtgtcccaatgatagctcttatttgcttacctgtggcaaagatagccgaac 993
Query: 798 tatatgctggaacactatttctggagag 825
|||||||||| |||||||||||||||||
Sbjct: 994 tatatgctgggacactatttctggagag 1021
Score = 153 bits (77), Expect = 3e-36
Identities = 113/125 (90%)
Strand = Plus / Plus
Query: 315 ccttgtaaggcataaaggaccggttcgtggtcttgagtttcataccactgaacctaatct 374
||||||||||||||||||||| ||||||||||||||||| |||||| || |||||| ||
Sbjct: 481 ccttgtaaggcataaaggacctgttcgtggtcttgagttcaataccattgcacctaacct 540
Query: 375 tcttgcctctggtgctgaggatggtcagatctgcatatgggatttggccaatgctttaga 434
|||||| |||||||||||||||||| | || ||||||||||||||||||||| ||| |||
Sbjct: 541 tcttgcatctggtgctgaggatggtgaaatttgcatatgggatttggccaatccttcaga 600
Query: 435 gccta 439
|||||
Sbjct: 601 gccta 605