Miyakogusa Predicted Gene
- Lj0g3v0038759.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0038759.2 tr|C0JX14|C0JX14_9CHLO Hypothetical chloroplast
RF65 OS=Pyramimonas parkeae GN=ycf65 PE=4
SV=1,57.53,7e-17,RRP3_SPIOL_P82412;,Ribosomal protein PSRP-3/Ycf65;
PSRP-3_Ycf65,Ribosomal protein PSRP-3/Ycf65,CUFF.1745.2
(224 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80137 homologue to UniRef100_A7PAP3 Cluster: Chromoso... 444 e-124
gnl|LJGI|TC67947 homologue to UniRef100_A7PAP3 Cluster: Chromoso... 414 e-116
gnl|LJGI|TC59929 homologue to UniRef100_A7PAP3 Cluster: Chromoso... 414 e-116
gnl|LJGI|TC75039 homologue to UniRef100_A7PAP3 Cluster: Chromoso... 365 e-101
gnl|LJGI|TC60889 homologue to UniRef100_A7PAP3 Cluster: Chromoso... 365 e-101
>gnl|LJGI|TC80137 homologue to UniRef100_A7PAP3 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (53%)
Length = 523
Score = 444 bits (224), Expect = e-124
Identities = 224/224 (100%)
Strand = Plus / Plus
Query: 1 atggagaagaacattggcattgcacttgaccaagctgtaccgggccacgacaccattcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 atggagaagaacattggcattgcacttgaccaagctgtaccgggccacgacaccattcct 163
Query: 61 ctcagcccttattacttttggccaaggaaagatgcttgggaagagctcaaggagttactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 ctcagcccttattacttttggccaaggaaagatgcttgggaagagctcaaggagttactc 223
Query: 121 gagagcaagccttggatatcacaaaagcagatgattattcttctgaaccaagcaactgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 gagagcaagccttggatatcacaaaagcagatgattattcttctgaaccaagcaactgat 283
Query: 181 atcatcaatttgtggcagcagagtggtggcaacttgtcctgaaa 224
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 atcatcaatttgtggcagcagagtggtggcaacttgtcctgaaa 327
>gnl|LJGI|TC67947 homologue to UniRef100_A7PAP3 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 797
Score = 414 bits (209), Expect = e-116
Identities = 221/224 (98%), Gaps = 2/224 (0%)
Strand = Plus / Plus
Query: 1 atggagaagaacattggcattgcacttgaccaagctgtaccgggccacgacaccattcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 atggagaagaacattggcattgcacttgaccaagctgtaccgggccacgacaccattcct 212
Query: 61 ctcagcccttattacttttggccaaggaaagatgcttgggaagagctcaaggagttactc 120
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 213 ctcagcccttattacttttggccaaggaaagatgcttgggaag--ctcaaggagttactc 270
Query: 121 gagagcaagccttggatatcacaaaagcagatgattattcttctgaaccaagcaactgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 gagagcaagccttggatatcacaaaagcagatgattattcttctgaaccaagcaactgat 330
Query: 181 atcatcaatttgtggcagcagagtggtggcaacttgtcctgaaa 224
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ctcatcaatttgtggcagcagagtggtggcaacttgtcctgaaa 374
>gnl|LJGI|TC59929 homologue to UniRef100_A7PAP3 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 750
Score = 414 bits (209), Expect = e-116
Identities = 221/224 (98%), Gaps = 2/224 (0%)
Strand = Plus / Plus
Query: 1 atggagaagaacattggcattgcacttgaccaagctgtaccgggccacgacaccattcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 atggagaagaacattggcattgcacttgaccaagctgtaccgggccacgacaccattcct 400
Query: 61 ctcagcccttattacttttggccaaggaaagatgcttgggaagagctcaaggagttactc 120
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 401 ctcagcccttattacttttggccaaggaaagatgcttgggaag--ctcaaggagttactc 458
Query: 121 gagagcaagccttggatatcacaaaagcagatgattattcttctgaaccaagcaactgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gagagcaagccttggatatcacaaaagcagatgattattcttctgaaccaagcaactgat 518
Query: 181 atcatcaatttgtggcagcagagtggtggcaacttgtcctgaaa 224
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ctcatcaatttgtggcagcagagtggtggcaacttgtcctgaaa 562
>gnl|LJGI|TC75039 homologue to UniRef100_A7PAP3 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (53%)
Length = 727
Score = 365 bits (184), Expect = e-101
Identities = 214/224 (95%)
Strand = Plus / Plus
Query: 1 atggagaagaacattggcattgcacttgaccaagctgtaccgggccacgacaccattcct 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 437 atggagaagaacattggcattgcacttgaccaagctgtaccgggccacggcaccatccct 496
Query: 61 ctcagcccttattacttttggccaaggaaagatgcttgggaagagctcaaggagttactc 120
||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||
Sbjct: 497 ctcagcccttattacttttggccgaggaaagatgcttgggaagagctgaaggagttgctc 556
Query: 121 gagagcaagccttggatatcacaaaagcagatgattattcttctgaaccaagcaactgat 180
|||||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||||
Sbjct: 557 gagagcaagccttggatatctcaaaagcagatgattattcttctcaatcaagctactgat 616
Query: 181 atcatcaatttgtggcagcagagtggtggcaacttgtcctgaaa 224
||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 617 atcatcaatttgtggcagcagagtggtggcaacttatcctgaaa 660
>gnl|LJGI|TC60889 homologue to UniRef100_A7PAP3 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (53%)
Length = 755
Score = 365 bits (184), Expect = e-101
Identities = 214/224 (95%)
Strand = Plus / Plus
Query: 1 atggagaagaacattggcattgcacttgaccaagctgtaccgggccacgacaccattcct 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 352 atggagaagaacattggcattgcacttgaccaagctgtaccgggccacggcaccatccct 411
Query: 61 ctcagcccttattacttttggccaaggaaagatgcttgggaagagctcaaggagttactc 120
||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||
Sbjct: 412 ctcagcccttattacttttggccgaggaaagatgcttgggaagagctgaaggagttgctc 471
Query: 121 gagagcaagccttggatatcacaaaagcagatgattattcttctgaaccaagcaactgat 180
|||||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||||
Sbjct: 472 gagagcaagccttggatatctcaaaagcagatgattattcttctcaatcaagctactgat 531
Query: 181 atcatcaatttgtggcagcagagtggtggcaacttgtcctgaaa 224
||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 532 atcatcaatttgtggcagcagagtggtggcaacttatcctgaaa 575