Miyakogusa Predicted Gene
- Lj0g3v0038529.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0038529.1 tr|G7J2G4|G7J2G4_MEDTR Sodium-coupled neutral
amino acid transporter OS=Medicago truncatula
GN=MTR_3,45.22,3e-16,Aa_trans,Amino acid transporter, transmembrane;
seg,NULL; AMINO ACID
TRANSPORTER,NULL,NODE_66363_length_1809_cov_48.702599.path1.1
(1401 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76553 weakly similar to UniRef100_A7PAH1 Cluster: Chr... 1146 0.0
gnl|LJGI|TC74512 similar to UniRef100_A7PAH1 Cluster: Chromosome... 1078 0.0
gnl|LJGI|TC66953 similar to UniRef100_A7PAH1 Cluster: Chromosome... 66 6e-10
>gnl|LJGI|TC76553 weakly similar to UniRef100_A7PAH1 Cluster: Chromosome chr14
scaffold_9, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_9, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (40%)
Length = 682
Score = 1146 bits (578), Expect = 0.0
Identities = 581/582 (99%)
Strand = Plus / Plus
Query: 75 gaagaatcttcgtggtgcagcagcatcgttcactggctctgtcttcaatctatcaaccac 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 gaagaatcttcgtggtgcagcagcatcgttcactggctctgtcttcaatctatcaaccac 160
Query: 135 catcatcggtgctggaatcatggccttacccgcagccatcaaagttctcggcgtcgctgc 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 catcatcggtgctggaatcatggccttacccgcagccatcaaagttctcggcgtcgctgc 220
Query: 195 gggcattgctgcaatcatcttcctcgctttcctcactgagacttctctcgacattctcat 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 gggcattgctgcaatcatcttcctcgctttcctcactgagacttctctcgacattctcat 280
Query: 255 gaggtttagcagagttggcaatgctaggtcttatggcgatgtcatgggttacgcttttgg 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 gaggtttagcagagttggcaatgctaggtcttatggcgatgtcatgggttacgcttttgg 340
Query: 315 ttgggttggaagattggttcttcagatttctgttcttatcaacaactttgggattctcgt 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ttgggttggaagattggttcttcagatttctgttcttatcaacaactttgggattctcgt 400
Query: 375 tgtctacgtgatcataattggtgatgtgctgtctggaacatcttcaactggaattcatca 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tgtctacgtgatcataattggtgatgtgctgtctggaacatcttcaactggaattcatca 460
Query: 435 tttcggtgttttggaaggatggtttggtgaacattggtggactggacgcgctttcgttct 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 tttcggtgttttggaaggatggtttggtgaacattggtggactggacgcgctttcgttct 520
Query: 495 tcttgtcgcgaccattttggtatttactcctttggggttttttaagaggatagattcatt 554
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 521 tcttgtcgcgaccattttggtatttactcctttggggttttttaagagggtagattcatt 580
Query: 555 gagatatacttctgctttagcggtggctctggcagttatgtttcttgtcataattgcagg 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 gagatatacttctgctttagcggtggctctggcagttatgtttcttgtcataattgcagg 640
Query: 615 aatcacaattgtgaagttgtttaatggcagtatagagcgtcc 656
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 aatcacaattgtgaagttgtttaatggcagtatagagcgtcc 682
Score = 101 bits (51), Expect = 1e-20
Identities = 51/51 (100%)
Strand = Plus / Plus
Query: 1 atgggccaaaacgaagtcgctgttgaatcaccattgctaaccagcaacaaa 51
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24 atgggccaaaacgaagtcgctgttgaatcaccattgctaaccagcaacaaa 74
>gnl|LJGI|TC74512 similar to UniRef100_A7PAH1 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 880
Score = 1078 bits (544), Expect = 0.0
Identities = 547/548 (99%)
Strand = Plus / Plus
Query: 854 ttggatttctcctatttggtgagtctacccttgatgacgtgcttgccaactttgatactg 913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttggatttctcctatttggtgagtctacccttgatgacgtgcttgccaactttgatactg 60
Query: 914 atctgggcatcccttatagcagtctgctcaatgacattgttcgtatcagctacgccctcc 973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atctgggcatcccttatagcagtctgctcaatgacattgttcgtatcagctacgccctcc 120
Query: 974 acctcatgcttgttttcccagttatcttcttttcgctgcgcttcaatttggatgatctta 1033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acctcatgcttgttttcccagttatcttcttttcgctgcgcttcaatttggatgatctta 180
Query: 1034 tctttccttcagctaggtcattggatttagataggtgtaggtttgtcttcatcaccactg 1093
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 181 tctttccttcagctaggtcattggatttagataggtgtaggtttgtcttcatcaccaccg 240
Query: 1094 gactcattgctttgctctatgtggctgccaattttgtacctagcatctggactgtttttc 1153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gactcattgctttgctctatgtggctgccaattttgtacctagcatctggactgtttttc 300
Query: 1154 aattcactggagcaactgccactgtttgccttgggtttattttccctggtgcaattgctc 1213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aattcactggagcaactgccactgtttgccttgggtttattttccctggtgcaattgctc 360
Query: 1214 taagggacccccaaggtgttgcaacgaagaaggacaaaattttatccattgtcatgattt 1273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taagggacccccaaggtgttgcaacgaagaaggacaaaattttatccattgtcatgattt 420
Query: 1274 ttctggctgtcttctcaaacgttgtggctatatacagcaatgccgatgccttgttcagaa 1333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttctggctgtcttctcaaacgttgtggctatatacagcaatgccgatgccttgttcagaa 480
Query: 1334 aacatgttgatcctcaccattcattatcagaaaaattgtctctactgatctactctcaag 1393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aacatgttgatcctcaccattcattatcagaaaaattgtctctactgatctactctcaag 540
Query: 1394 acatttaa 1401
||||||||
Sbjct: 541 acatttaa 548
>gnl|LJGI|TC66953 similar to UniRef100_A7PAH1 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (61%)
Length = 1261
Score = 65.9 bits (33), Expect = 6e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 1282 gtcttctcaaacgttgtggctatatacagcaatgccgatgccttg 1326
||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 810 gtcttctcaaacgttgtggctatatacagtgatgcctatgccttg 854