Miyakogusa Predicted Gene
- Lj0g3v0038229.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0038229.1 Non Chatacterized Hit- tr|I1L6H0|I1L6H0_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,30.32,3e-19,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; PPR,Pentatricopeptide repeat;
PPR: pentatricopeptid,CUFF.1715.1
(587 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS333759 weakly similar to UniRef100_A7Q622 Cluster: Ch... 238 3e-62
gnl|LJGI|GO037297 weakly similar to UniRef100_A7Q622 Cluster: Ch... 210 7e-54
gnl|LJGI|FS341384 weakly similar to UniRef100_A7Q622 Cluster: Ch... 159 2e-38
gnl|LJGI|FS336741 weakly similar to UniRef100_A7QVP2 Cluster: Ch... 103 1e-21
gnl|LJGI|TC77080 weakly similar to UniRef100_A7QVP2 Cluster: Chr... 64 1e-09
>gnl|LJGI|FS333759 weakly similar to UniRef100_A7Q622 Cluster: Chromosome chr14
scaffold_54, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_54, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (21%)
Length = 766
Score = 238 bits (120), Expect = 3e-62
Identities = 183/204 (89%)
Strand = Plus / Plus
Query: 1 atgggacagacaagagcttcactgcagttactgagaaagattgaagggaaattggttatg 60
|||||| | |||||||||||| ||||||| ||| |||| ||||||||||||||||| | |
Sbjct: 559 atgggaaaaacaagagcttcattgcagttgctgcgaaatattgaagggaaattggtaaag 618
Query: 61 cctaatgtggtaatgtactccaccatcattggtagcttctgcaaagataaacttgttagt 120
|||||||||||||||||| ||| ||||||| |||||| |||||||||||||||||||||
Sbjct: 619 cctaatgtggtaatgtacaacactatcattgatagcttgtgcaaagataaacttgttagt 678
Query: 121 gatgcgttcgatttatattctgaaatgcttgcaaagagaattttacctaatgttttcact 180
|||||||| ||||||||||||||||| |||| |||||| |||||||| |||||||||||
Sbjct: 679 gatgcgtttaatttatattctgaaatggttgccaagagagttttacctgatgttttcact 738
Query: 181 ttcaattctttaatatatggcttt 204
| |||| |||||||||||||||||
Sbjct: 739 tacaatgctttaatatatggcttt 762
>gnl|LJGI|GO037297 weakly similar to UniRef100_A7Q622 Cluster: Chromosome chr14
scaffold_54, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_54, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (18%)
Length = 537
Score = 210 bits (106), Expect = 7e-54
Identities = 265/318 (83%)
Strand = Plus / Plus
Query: 10 acaagagcttcactgcagttactgagaaagattgaagggaaattggttatgcctaatgtg 69
||||||||| | |||| || |||||| |||||||||||||||| ||| |||| |||||
Sbjct: 118 acaagagctgccctgcgattgctgagacagattgaagggaaattagttcagcctgatgtg 177
Query: 70 gtaatgtactccaccatcattggtagcttctgcaaagataaacttgttagtgatgcgttc 129
|| |||||| ||| ||||||| |||| ||||||||||||||||||| |||||||| | |
Sbjct: 178 gtcatgtacagcacaatcattgatagcctctgcaaagataaacttgtaagtgatgcctgc 237
Query: 130 gatttatattctgaaatgcttgcaaagagaattttacctaatgttttcactttcaattct 189
||||||||||| |||||| | |||||||||| |||| |||| ||||||||||| ||
Sbjct: 238 gatttatattcggaaatggtactcaagagaatttctcctactgttgtcactttcaatgct 297
Query: 190 ttaatatatggcttttgcattgtgggtctgttgaaagaagcaattagtttgttggatgaa 249
|||| |||||||||||||||||||||| |||||||||||| || ||||| | |||||
Sbjct: 298 ctaatttatggcttttgcattgtgggtcaattgaaagaagcagttggtttgctaaatgaa 357
Query: 250 atgataatgaaaaacattgaccctaatgcttatacttttaatatactgctcgatggtttg 309
||| | |||||||||| |||| | || | ||||||||||||| ||| | ||||| ||
Sbjct: 358 atggtgttgaaaaacatcaacccaattgttaatacttttaatattctggttgatgggtta 417
Query: 310 tgtaaggaaggaaaggtg 327
||||||||||||||||||
Sbjct: 418 tgtaaggaaggaaaggtg 435
>gnl|LJGI|FS341384 weakly similar to UniRef100_A7Q622 Cluster: Chromosome chr14
scaffold_54, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_54, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 802
Score = 159 bits (80), Expect = 2e-38
Identities = 200/240 (83%)
Strand = Plus / Plus
Query: 65 atgtggtaatgtactccaccatcattggtagcttctgcaaagataaacttgttagtgatg 124
|||||||||||||| || |||||||| |||| | || |||||||||||||| |||||||
Sbjct: 556 atgtggtaatgtacagcatcatcattgatagcctgtgtaaagataaacttgtaagtgatg 615
Query: 125 cgttcgatttatattctgaaatgcttgcaaagagaattttacctaatgttttcactttca 184
| | | ||||||||||||||||| ||| ||| |||| | ||| ||||| |||| | ||
Sbjct: 616 cttgcaatttatattctgaaatgattgtcaagggaatatctcctgatgttgtcacgtaca 675
Query: 185 attctttaatatatggcttttgcattgtgggtctgttgaaagaagcaattagtttgttgg 244
|| ||||||||||||||||||||||||| |||| |||||| |||||||| | ||| | |
Sbjct: 676 atgctttaatatatggcttttgcattgttggtcaattgaaacaagcaattgggttgctag 735
Query: 245 atgaaatgataatgaaaaacattgaccctaatgcttatacttttaatatactgctcgatg 304
|||||||| || |||||||||| ||||| ||| |||||||| ||||||| || ||||||
Sbjct: 736 atgaaatggtattgaaaaacatagacccagatgtttatacttataatatattggtcgatg 795
>gnl|LJGI|FS336741 weakly similar to UniRef100_A7QVP2 Cluster: Chromosome chr14
scaffold_190, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_190, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (30%)
Length = 760
Score = 103 bits (52), Expect = 1e-21
Identities = 124/148 (83%)
Strand = Plus / Plus
Query: 65 atgtggtaatgtactccaccatcattggtagcttctgcaaagataaacttgttagtgatg 124
|||||||||||||| ||| ||||| | |||| | || |||||||||||||| ||| |||
Sbjct: 609 atgtggtaatgtacagcacaatcatcgatagcctgtgtaaagataaacttgtaagtcatg 668
Query: 125 cgttcgatttatattctgaaatgcttgcaaagagaattttacctaatgttttcactttca 184
| | | |||||||||||||||||||||| ||| |||| | |||||||| |||| | ||
Sbjct: 669 cttgcaatttatattctgaaatgcttgccaagggaatatctcctaatgtagtcacgtaca 728
Query: 185 attctttaatatatggcttttgcattgt 212
| |||||||||||||||||||||||||
Sbjct: 729 gtgctttaatatatggcttttgcattgt 756
>gnl|LJGI|TC77080 weakly similar to UniRef100_A7QVP2 Cluster: Chromosome chr14
scaffold_190, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_190, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (19%)
Length = 898
Score = 63.9 bits (32), Expect = 1e-09
Identities = 86/104 (82%)
Strand = Plus / Plus
Query: 104 aagataaacttgttagtgatgcgttcgatttatattctgaaatgcttgcaaagagaattt 163
|||||||| ||| |||||||||| ||||||||| |||||||||| ||||||||||
Sbjct: 543 aagataaatgtgtaagtgatgcgtatgatttatataatgaaatgcttctcaagagaattt 602
Query: 164 tacctaatgttttcactttcaattctttaatatatggcttttgc 207
|| |||||||||||| |||| || |||| ||||||||||||
Sbjct: 603 ctccagatgttttcacttacaatactctaatctatggcttttgc 646