Miyakogusa Predicted Gene

Lj0g3v0037719.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0037719.1 Non Chatacterized Hit- tr|F6HDS0|F6HDS0_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,60,8e-16,ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN,NULL;
INOSITOL 5-PHOSPHATASE,NULL; no descriptio,CUFF.1692.1
         (804 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW595777 weakly similar to UniRef100_Q5BIZ7 Cluster: Tr...   119   3e-26
gnl|LJGI|AV779789                                                      74   1e-12

>gnl|LJGI|BW595777 weakly similar to UniRef100_Q5BIZ7 Cluster: Trim47_predicted
           protein; n=2; Rattus norvegicus|Rep: Trim47_predicted
           protein - Rattus, partial (3%)
          Length = 490

 Score =  119 bits (60), Expect = 3e-26
 Identities = 63/64 (98%)
 Strand = Plus / Minus

                                                                       
Query: 741 tgttaggaccccattacaaggtatgggacttgagtcccacattggaagtatgggattcta 800
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgttaggaccccattgcaaggtatgggacttgagtcccacattggaagtatgggattcta 362

               
Query: 801 atgt 804
           ||||
Sbjct: 361 atgt 358


>gnl|LJGI|AV779789 
          Length = 560

 Score = 73.8 bits (37), Expect = 1e-12
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                       
Query: 740 atgttaggaccccattacaaggtatgggacttgagtcccacattggaagtatgggattct 799
           |||||||||||| ||  ||||||||||||||||||||||||| ||  |||||| ||||||
Sbjct: 538 atgttaggacccaatcgcaaggtatgggacttgagtcccacactgacagtatgagattct 479

                
Query: 800 aatgt 804
           |||||
Sbjct: 478 aatgt 474