Miyakogusa Predicted Gene
- Lj0g3v0037709.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0037709.1 Non Chatacterized Hit- tr|I1NCV6|I1NCV6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,87.85,0,no
description,NULL; INTRON-BINDING PROTEIN AQUARIUS,Intron-binding
protein, aquarius; DNA2/NAM7 HEL,CUFF.2065.1
(4569 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC598581 similar to UniRef100_A7QA16 Cluster: Chromosom... 1033 0.0
gnl|LJGI|GO011529 similar to UniRef100_A7QA16 Cluster: Chromosom... 743 0.0
gnl|LJGI|TC77078 450 e-125
gnl|LJGI|BP066526 homologue to UniRef100_A7QA16 Cluster: Chromos... 276 1e-72
>gnl|LJGI|DC598581 similar to UniRef100_A7QA16 Cluster: Chromosome chr8 scaffold_68,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_68, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 549
Score = 1033 bits (521), Expect = 0.0
Identities = 545/549 (99%), Gaps = 3/549 (0%)
Strand = Plus / Plus
Query: 724 caccattctgatcagtcaactgcggttgaagttatgttcttgaggaacctcatagaagaa 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caccattctgatcagtcaactgcggttgaagttatgttcttgaggaacctcatagaagaa 60
Query: 784 ttt-ctg-gagatattg-gattcacaagtgtttccccagaggcagttgtctggtgagaat 840
||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttnctgagagatattgagattcacaagtgtttccccagaggcagttgtctggtgagaat 120
Query: 841 gatgaacttattgatggtgctgattttggtgtagttaatgatgcttgtgtcctttattgt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatgaacttattgatggtgctgattttggtgtagttaatgatgcttgtgtcctttattgt 180
Query: 901 gagaggtttatggaatttcttattgacctattgagtcaattgccaacgagaaggtatttg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gagaggtttatggaatttcttattgacctattgagtcaattgccaacgagaaggtatttg 240
Query: 961 aggcctctagtggctgatgtagctgtagttgccaaatgccacctgagtgcgctctatagg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aggcctctagtggctgatgtagctgtagttgccaaatgccacctgagtgcgctctatagg 300
Query: 1021 catgaaaagggaaaactttttgcccaattggttgatttattacaattctatgaagggttt 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 catgaaaagggaaaactttttgcccaattggttgatttattacaattctatgaagggttt 360
Query: 1081 gagattaacgatcatactggcacacagttaacagatcatgaggttctcgaatctcattac 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gagattaacgatcatactggcacacagttaacagatcatgaggttctcgaatctcattac 420
Query: 1141 agccgactgcaagcattccagctacttgcatttaagaagatgagcaagctgcgggaactt 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agccgactgcaagcattccagctacttgcatttaagaagatgagcaagctgcgggaactt 480
Query: 1201 tctttgactaacattggttcaattcacaagcgcgctaatctctccaagaaactgtctgtt 1260
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 481 tctttgactaacattggttcaattcacaagcgcgctaatctctccaagagactgtctgtt 540
Query: 1261 ctttctcct 1269
|||||||||
Sbjct: 541 ctttctcct 549
>gnl|LJGI|GO011529 similar to UniRef100_A7QA16 Cluster: Chromosome chr8 scaffold_68,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_68, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 388
Score = 743 bits (375), Expect = 0.0
Identities = 384/387 (99%)
Strand = Plus / Plus
Query: 4071 tgccatgtcacgagctcggctgggtttatatgttttttgccgccgttcccttttcgagca 4130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgccatgtcacgagctcggctgggtttatatgttttttgccgccgttcccttttcgagca 61
Query: 4131 gtgctatgagctgcagcctacatttcagcttcttctgaagagacctgaccaccttgccct 4190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gtgctatgagctgcagcctacatttcagcttcttctgaagagacctgaccaccttgccct 121
Query: 4191 taattttagtgagattacatcatgtactgaacgagatgttgaagatcctggacctcatat 4250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 taattttagtgagattacatcatgtactgaacgagatgttgaagatcctggacctcatat 181
Query: 4251 acatcttgtcagtggcattgaggagatgagtagtatcatagaaaggctgtgtcaggaaaa 4310
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 182 acatcttgtcagtggcattggggagatgagtagtatcatagaaaggctgtgtcaggaaaa 241
Query: 4311 gttgagatatcagtttgagcaaaatggatctcattttagtcacccagaaccatctgtaaa 4370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 242 gttgagatatcagtttgagcaaaatggatctcattttagtcacccagaaccatctgttaa 301
Query: 4371 cacaacagatgtggtgcaaaacaggcagcagattgtggacactgatatgcctgaacagac 4430
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 302 cacaacagatgtggtgcaaaacaggcagcagaatgtggacactgatatgcctgaacagac 361
Query: 4431 agatgatgaaagtgaggaagctacaaa 4457
|||||||||||||||||||||||||||
Sbjct: 362 agatgatgaaagtgaggaagctacaaa 388
>gnl|LJGI|TC77078
Length = 624
Score = 450 bits (227), Expect = e-125
Identities = 251/259 (96%)
Strand = Plus / Plus
Query: 4311 gttgagatatcagtttgagcaaaatggatctcattttagtcacccagaaccatctgtaaa 4370
|||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |
Sbjct: 1 gttgagatatcagtttgagctaaatggatctcattttagtcacccagacccatctgtata 60
Query: 4371 cacaacagatgtggtgcaaaacaggcagcagattgtggacactgatatgcctgaacagac 4430
|||||| |||||||||| |||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 61 cacaaccgatgtggtgctaaaccggcagcagattgtggacactgatatgcctgaaccgac 120
Query: 4431 agatgatgaaagtgaggaagctacaaatgttgagaaccatgtgactggagacgtgccacc 4490
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 121 agatgatgaaagtgaggaagctacaaatgttgagtaccatgtgactggagacgtgccacc 180
Query: 4491 agaagatagtagcatggaggatgttactactggtggtggcagtgctagtgttgcaaatgg 4550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agaagatagtagcatggaggatgttactactggtggtggcagtgctagtgttgcaaatgg 240
Query: 4551 gagcccaacagtataggag 4569
|||||||||||||||||||
Sbjct: 241 gagcccaacagtataggag 259
>gnl|LJGI|BP066526 homologue to UniRef100_A7QA16 Cluster: Chromosome chr8 scaffold_68,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_68, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 440
Score = 276 bits (139), Expect = 1e-72
Identities = 141/142 (99%)
Strand = Plus / Minus
Query: 2667 tgtggggccacctggtacgggaaagactgatacagctgtacaaattttgaatgttcttta 2726
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgtgggnccacctggtacgggaaagactgatacagctgtacaaattttgaatgttcttta 381
Query: 2727 tcataattgtccttctcagagaaccttaataattactcattcaaatcaagctctgaatga 2786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tcataattgtccttctcagagaaccttaataattactcattcaaatcaagctctgaatga 321
Query: 2787 cctgtttgagaagataatgcag 2808
||||||||||||||||||||||
Sbjct: 320 cctgtttgagaagataatgcag 299