Miyakogusa Predicted Gene
- Lj0g3v0037529.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0037529.1 Non Chatacterized Hit- tr|I3SSG2|I3SSG2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.36,0,DNA-binding domain,DNA-binding, integrase-type;
AP2_ERF,AP2/ERF domain; SUBFAMILY NOT NAMED,NULL; FA,CUFF.1681.1
(1260 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59743 similar to UniRef100_A7NZC0 Cluster: Chromosome... 1243 0.0
gnl|LJGI|GO009797 homologue to UniRef100_A7NZB9 Cluster: Chromos... 585 e-166
gnl|LJGI|TC82553 similar to UniRef100_A7NZC0 Cluster: Chromosome... 406 e-112
gnl|LJGI|TC68944 homologue to UniRef100_Q9AXI4 Cluster: APETAL2-... 86 6e-16
>gnl|LJGI|TC59743 similar to UniRef100_A7NZC0 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (39%)
Length = 929
Score = 1243 bits (627), Expect = 0.0
Identities = 627/627 (100%)
Strand = Plus / Plus
Query: 634 gaggaattcgtgcacatactgcgtcgccacagcaccggtttctcaagggggagctcaaaa 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaggaattcgtgcacatactgcgtcgccacagcaccggtttctcaagggggagctcaaaa 60
Query: 694 taccgtggagtgacacttcacaaatgtggccgttgggaagctcgaatggggcaattcctt 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taccgtggagtgacacttcacaaatgtggccgttgggaagctcgaatggggcaattcctt 120
Query: 754 ggcaaaaaggcctatgacaaggcagctctcaagtgcaatggaagagaggcagtgaccaac 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggcaaaaaggcctatgacaaggcagctctcaagtgcaatggaagagaggcagtgaccaac 180
Query: 814 tttgagccatgtacatatgaaagcgagatgaaacccgaagctattaatgaaggtggcaat 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttgagccatgtacatatgaaagcgagatgaaacccgaagctattaatgaaggtggcaat 240
Query: 874 cacaatcttgacctcaatttgggtatggcaaccccaggacatggtcccaaagataacagg 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cacaatcttgacctcaatttgggtatggcaaccccaggacatggtcccaaagataacagg 300
Query: 934 ggtcatcttcagtcccagcctgtcccttacaacatgcatcctggaagaagttcaaagatg 993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggtcatcttcagtcccagcctgtcccttacaacatgcatcctggaagaagttcaaagatg 360
Query: 994 gagacaaatgctaattcagtcattggtgatccgtctttgaaaaggctggtagttactcaa 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gagacaaatgctaattcagtcattggtgatccgtctttgaaaaggctggtagttactcaa 420
Query: 1054 gaccgtccttctgtatggaattccacgtactcccgtttctttcccactgaggaaagagca 1113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaccgtccttctgtatggaattccacgtactcccgtttctttcccactgaggaaagagca 480
Query: 1114 gagagaataggcttagatccttcaaaaggacatagcaactgggcgtggcaaacgcatggg 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gagagaataggcttagatccttcaaaaggacatagcaactgggcgtggcaaacgcatggg 540
Query: 1174 caagtgagcggtgctaccccagtaccaccgttctcttctgcagcatcatcaggattctca 1233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 caagtgagcggtgctaccccagtaccaccgttctcttctgcagcatcatcaggattctca 600
Query: 1234 atttcagctacctttccaccacccact 1260
|||||||||||||||||||||||||||
Sbjct: 601 atttcagctacctttccaccacccact 627
>gnl|LJGI|GO009797 homologue to UniRef100_A7NZB9 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 725
Score = 585 bits (295), Expect = e-166
Identities = 335/342 (97%), Gaps = 6/342 (1%)
Strand = Plus / Plus
Query: 326 agaacggtgaggtgaaggtggttcaggtaccgcaaccgcaacagcctcaggtgaagaaga 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 agaacggtgaggtgaaggtggttcaggtaccgcaaccgcaacagcctcaggtgaagaaga 449
Query: 386 gtaggaggggtccaaggtctcggagctctcagtacagaggagtcaccttctacaggagga 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 gtaggaggggtccaaggtctcggagctctcagtacagaggagtcaccttctacaggagga 509
Query: 446 ccggaagatgggaatcgcatatctgggattgcgggaaacaagtctatttgggtggatttg 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ccggaagatgggaatcgcatatctgggattgcgggaaacaagtctatttgggtggatttg 569
Query: 506 ataccgctcatgcagctgctagagcttatgatcgagctgcaatcaagttcaggggtcttg 565
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 570 ataccgctcatgcagctgctagagcttatgatcgagctgcaatcaagttca-gggtcttg 628
Query: 566 atgctgacattaatttcaaccttgttgattatgaggacgatctgaaacagatgaagaatc 625
|||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||
Sbjct: 629 atgctgacattaatttcaaccttgttgattatga-gacgatctg-aacagatgaag-atc 685
Query: 626 tctccaaggaggaattcgtgcacatactgcgtcgccacagca 667
|||||||| |||||||||||||||||||||||||||||||
Sbjct: 686 tctccaag--agaattcgtgcacatactgcgtcgccacagca 725
Score = 121 bits (61), Expect = 1e-26
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 1 atgttagatcttaatctgaatgctgagtcgactcacaacgatgactcgtttctcgaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 atgttagatcttaatctgaatgctgagtcgactcacaacgatgactcgtttctcgaagaa 390
Query: 61 g 61
|
Sbjct: 391 g 391
>gnl|LJGI|TC82553 similar to UniRef100_A7NZC0 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (16%)
Length = 1304
Score = 406 bits (205), Expect = e-112
Identities = 223/229 (97%)
Strand = Plus / Plus
Query: 762 ggcctatgacaaggcagctctcaagtgcaatggaagagaggcagtgaccaactttgagcc 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 ggcctatgacaaggcagctctcaagtgcaatggaagagaggcagtgaccaactttgagcc 866
Query: 822 atgtacatatgaaagcgagatgaaacccgaagctattaatgaaggtggcaatcacaatct 881
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 867 atgtacatatgaaagcgagatgaaacccgaagctattaatgaaggtggtaatcacaatct 926
Query: 882 tgacctcaatttgggtatggcaaccccaggacatggtcccaaagataacaggggtcatct 941
|||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 927 tgacctcaatttggttatggcaaccccaggaaatggtcccaaagataacaggggtcattt 986
Query: 942 tcagtcccagcctgtcccttacaacatgcatcctggaagaagttcaaag 990
|||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 987 tcagtcccagcccgtcccttacaacatgcatcctggaagaatttcaaag 1035
>gnl|LJGI|TC68944 homologue to UniRef100_Q9AXI4 Cluster: APETAL2-like protein; n=1;
Pisum sativum|Rep: APETAL2-like protein - Pisum sativum
(Garden pea), partial (25%)
Length = 928
Score = 85.7 bits (43), Expect = 6e-16
Identities = 145/179 (81%)
Strand = Plus / Plus
Query: 377 tgaagaagagtaggaggggtccaaggtctcggagctctcagtacagaggagtcaccttct 436
||||||||||| | | || |||||||| || ||||| ||||| |||||||| || || |
Sbjct: 750 tgaagaagagtcgccgaggaccaaggtcgcgtagctcacagtatagaggagttacttttt 809
Query: 437 acaggaggaccggaagatgggaatcgcatatctgggattgcgggaaacaagtctatttgg 496
|||| || || || ||||||| || || || |||||||| || |||||||| ||| |||
Sbjct: 810 acagaagaactggtcgatgggagtctcacatatgggattgtggaaaacaagtgtatctgg 869
Query: 497 gtggatttgataccgctcatgcagctgctagagcttatgatcgagctgcaatcaagttc 555
|||||||||| || || ||||| |||||| |||| |||||| ||||||| || ||||||
Sbjct: 870 gtggatttgacactgcacatgctgctgctcgagcatatgatagagctgccattaagttc 928