Miyakogusa Predicted Gene
- Lj0g3v0037469.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0037469.1 Non Chatacterized Hit- tr|F4KY41|F4KY41_HALH1
Putative uncharacterized protein (Precursor)
OS=Halisc,28.36,1.7,seg,NULL,CUFF.1662.1
(444 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV766686 similar to UniRef100_Q95US3 Cluster: Pairberry... 561 e-159
gnl|LJGI|TC79917 527 e-149
gnl|LJGI|BP035018 similar to UniRef100_A4GSN7 Cluster: Ferritin ... 504 e-142
gnl|LJGI|TC80298 similar to UniRef100_Q591P1 Cluster: NADH-ubiqu... 398 e-110
gnl|LJGI|FS353380 similar to UniRef100_A8W9B6 Cluster: Cytochrom... 230 6e-60
gnl|LJGI|TC77966 208 2e-53
gnl|LJGI|AV765738 204 3e-52
gnl|LJGI|AV769500 similar to UniRef100_A7SBG6 Cluster: Predicted... 155 3e-37
gnl|LJGI|TC79302 115 2e-25
>gnl|LJGI|AV766686 similar to UniRef100_Q95US3 Cluster: Pairberry 1 transcription
factor; n=1; Schistocerca americana|Rep: Pairberry 1
transcription factor - Schistocerca americana (American
grasshopper), partial (7%)
Length = 536
Score = 561 bits (283), Expect = e-159
Identities = 392/427 (91%), Gaps = 1/427 (0%)
Strand = Plus / Minus
Query: 4 tccacaagaaaacccatgttccggatcgtcgttccgtcgctgttgaccgccgccgctgcc 63
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 426 tccacaacaaaacccatgttccggatcgtcgttccgtcgctgtcgaccgccgccgctgcc 367
Query: 64 gccttcgggagctctttctggtcaactccgacgaccgatgaaaagacggaggatactgct 123
||||||||||||| |||| ||||||||||| ||||||||| ||| || ||||||||| ||
Sbjct: 366 gccttcgggagctttttccggtcaactccggcgaccgatggaaaaacagaggatactact 307
Query: 124 acgatccttgccgtgaggagagcgaaatactattttcaatttcatatttgggtcatttta 183
||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 306 acgatccttgccgcgaggagagaaaaaccctattttcaatttcatatttgggtcatttta 247
Query: 184 ttcgacgaccccgacgaccaccgtcgaccttcggctaaactttctgggcaaaccgtcgac 243
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 246 ttcgacgaccccgacgaccaccgtcgaccttcggctgaactttctgggcaaaccgtcgat 187
Query: 244 tctttggggaaacggacagcgccgttgagtttctggctgcgaaaggatgaaggaacaacc 303
|||||||||||||||||| ||||||||| || ||||| ||||||||||||||||||||||
Sbjct: 186 tctttggggaaacggacaacgccgttgaattcctggccgcgaaaggatgaaggaacaacc 127
Query: 304 ttcctttgtgtctccggagacagtttctccatcaaccccgtgagccgcaactttctctcg 363
||||||||||||||||| |||| | |||| |||||||||||||||||||||| ||||
Sbjct: 126 ttcctttgtgtctccggcgacaatccctccgtcaaccccgtgagccgcaacttcctct-a 68
Query: 364 cgacccttcgcagacaagtttctaaaacttaattttcgtaagccttcaactcttgtatat 423
|||| || | | ||||||||||| |||||| |||||| ||||||||||||||||||||||
Sbjct: 67 cgactctccaccgacaagtttctgaaacttgattttcataagccttcaactcttgtatat 8
Query: 424 gttttag 430
|||||||
Sbjct: 7 gttttag 1
>gnl|LJGI|TC79917
Length = 634
Score = 527 bits (266), Expect = e-149
Identities = 365/398 (91%)
Strand = Plus / Minus
Query: 6 cacaagaaaacccatgttccggatcgtcgttccgtcgctgttgaccgccgccgctgccgc 65
||||| ||||||||||||||| ||||||||||||||| || || |||||||||||||||
Sbjct: 590 cacaacaaaacccatgttccgaatcgtcgttccgtcgtcgtcgaacgccgccgctgccgc 531
Query: 66 cttcgggagctctttctggtcaactccgacgaccgatgaaaagacggaggatactgctac 125
|||||||||||||||| ||||||||||| ||||||| | ||| | ||||||||||||||
Sbjct: 530 cttcgggagctctttccggtcaactccggcgaccgaaggaaaagcagaggatactgctac 471
Query: 126 gatccttgccgtgaggagagcgaaatactattttcaatttcatatttgggtcattttatt 185
||||||||||||||||||||| ||| |||| ||||||||| ||||||||||||||||||
Sbjct: 470 gatccttgccgtgaggagagcaaaaccctatcttcaatttcgtatttgggtcattttatt 411
Query: 186 cgacgaccccgacgaccaccgtcgaccttcggctaaactttctgggcaaaccgtcgactc 245
|||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 410 cgacgaccccgataaccaccgtcgaccttcggctgaactttctgggcaaaccgtcgactc 351
Query: 246 tttggggaaacggacagcgccgttgagtttctggctgcgaaaggatgaaggaacaacctt 305
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 350 tttggggaaacggacagcgccgttgagtttctggccgcgaaaggatgaaggaacaacctt 291
Query: 306 cctttgtgtctccggagacagtttctccatcaaccccgtgagccgcaactttctctcgcg 365
||||||||| ||||| ||||||| |||| |||||||||||||| |||||||||||| |||
Sbjct: 290 cctttgtgtttccggcgacagttcctccgtcaaccccgtgagcggcaactttctctggcg 231
Query: 366 acccttcgcagacaagtttctaaaacttaattttcgta 403
|| |||||| |||||||||| |||||| |||||||||
Sbjct: 230 actcttcgccgacaagtttcagaaacttgattttcgta 193
>gnl|LJGI|BP035018 similar to UniRef100_A4GSN7 Cluster: Ferritin 3; n=1; Triticum
aestivum|Rep: Ferritin 3 - Triticum aestivum (Wheat),
partial (5%)
Length = 441
Score = 504 bits (254), Expect = e-142
Identities = 388/433 (89%)
Strand = Plus / Minus
Query: 12 aaaacccatgttccggatcgtcgttccgtcgctgttgaccgccgccgctgccgccttcgg 71
|||||||||||||||||||||||||||||||| | |||||| |||||||||||| ||||
Sbjct: 440 aaaacccatgttccggatcgtcgttccgtcgccgcggaccgcggccgctgccgccgtcgg 381
Query: 72 gagctctttctggtcaactccgacgaccgatgaaaagacggaggatactgctacgatcct 131
||||| |||| ||||||||||||||||| ||| ||| |||||| |||||| |||||||
Sbjct: 380 gagctttttccggtcaactccgacgaccaatggaaaaacggagtgtactgcggcgatcct 321
Query: 132 tgccgtgaggagagcgaaatactattttcaatttcatatttgggtcattttattcgacga 191
|| || |||||||| || |||||||| ||||||||||| ||||||||||||||||||
Sbjct: 320 tgtcgcgaggagagtaaatccctattttctatttcatatttcggtcattttattcgacga 261
Query: 192 ccccgacgaccaccgtcgaccttcggctaaactttctgggcaaaccgtcgactctttggg 251
||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 260 ccccgacgaccaccgtcgaccatcggctgaactttctgggcaaaccgtcgactctttggg 201
Query: 252 gaaacggacagcgccgttgagtttctggctgcgaaaggatgaaggaacaaccttcctttg 311
|||||||||| || |||||| || || || |||||||||||||||||||||||| |||||
Sbjct: 200 gaaacggacaacgtcgttgaattccttgccgcgaaaggatgaaggaacaacctttctttg 141
Query: 312 tgtctccggagacagtttctccatcaaccccgtgagccgcaactttctctcgcgaccctt 371
||||||||| ||||||| |||| ||| |||| |||||||||||||||||| ||||| |||
Sbjct: 140 tgtctccggcgacagttcctccgtcagccccatgagccgcaactttctctagcgactctt 81
Query: 372 cgcagacaagtttctaaaacttaattttcgtaagccttcaactcttgtatatgttttagc 431
||| |||||||||| | |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 80 cgccgacaagtttcacanacttgattttcgtaagccttcaactcttgtatatgttttagc 21
Query: 432 atcgagtaagcaa 444
||||||||||||
Sbjct: 20 ctcgagtaagcaa 8
>gnl|LJGI|TC80298 similar to UniRef100_Q591P1 Cluster: NADH-ubiquinone oxidoreductase
chain 4; n=1; Microcebus griseorufus|Rep:
NADH-ubiquinone oxidoreductase chain 4 - Microcebus
griseorufus (Gray-brown mouse lemur), partial (4%)
Length = 1054
Score = 398 bits (201), Expect = e-110
Identities = 384/441 (87%), Gaps = 3/441 (0%)
Strand = Plus / Plus
Query: 5 ccacaagaaaacccatgttccggatcgtcgttccgtcgctgttgaccgccgccgctgccg 64
|||||| |||||||||||| ||||||||||||| ||||| | ||| |||| ||||||||
Sbjct: 312 ccacaacaaaacccatgtttcggatcgtcgttctgtcgcattcgactgccgtcgctgccg 371
Query: 65 ccttcgggagctctttctggtcaactccgacgaccgatgaaaagacggaggatactgcta 124
|||||||||||| | || |||||||||| ||||| ||| ||| | |||| |||||| |
Sbjct: 372 ccttcgggagctttatccggtcaactccagcgaccaatgtaaaaatggagtgtactgcaa 431
Query: 125 cgatccttgccgtgaggagagcgaaatactattttcaatttcatatttgggtcattttat 184
|||||| || || |||||||| || ||||||||||||| ||||||||||||||||||
Sbjct: 432 cgatccatgtcgcgaggagagtaaatccctattttcaatttaatatttgggtcattttat 491
Query: 185 tcgacgaccccgacgaccaccgtcgaccttcggctaaactttct-gggcaaaccgtcgac 243
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 492 tcgacgaccccgacgaccaccgtcgaccttcggctgaactttctggggcaaaccgtcgat 551
Query: 244 tctttggggaaacggacagcgccgttgagtttctggctgcgaaaggatgaaggaacaacc 303
|||||||||||||||| ||| |||||||| |||| || |||||||||| |||||||| ||
Sbjct: 552 tctttggggaaacggatagc-ccgttgagcttctagccgcgaaaggataaaggaacaccc 610
Query: 304 ttcctttgtgtctccggagacagtttctccatcaaccccgtgagccgcaactttctctcg 363
||||||||||| ||||| ||||||| |||| |||| |||||||||||||||||| | |
Sbjct: 611 ttcctttgtgtttccggcgacagttcctccgtcaa-cccgtgagccgcaactttttttga 669
Query: 364 cgacccttcgcagacaagtttctaaaacttaattttcgtaagccttcaactcttgtatat 423
|||| ||||| ||||||| | |||||||| ||||||||||||||||||||||||||||
Sbjct: 670 cgacttttcgccgacaagtgtttaaaacttggttttcgtaagccttcaactcttgtatat 729
Query: 424 gttttagcatcgagtaagcaa 444
|||||||| || |||||||||
Sbjct: 730 gttttagcctcaagtaagcaa 750
>gnl|LJGI|FS353380 similar to UniRef100_A8W9B6 Cluster: Cytochrome b; n=1; Plestiodon
marginatus|Rep: Cytochrome b - Plestiodon marginatus,
partial (5%)
Length = 694
Score = 230 bits (116), Expect = 6e-60
Identities = 167/184 (90%)
Strand = Plus / Minus
Query: 117 tactgctacgatccttgccgtgaggagagcgaaatactattttcaatttcatatttgggt 176
|||||| || |||||||||| |||||||| || ||| ||||||||||||||||||||
Sbjct: 674 tactgcgaccatccttgccgcgaggagagtaaatccctaatttcaatttcatatttgggt 615
Query: 177 cattttattcgacgaccccgacgaccaccgtcgaccttcggctaaactttctgggcaaac 236
||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 614 cattttattcgacgaccccgacgaccaccgtcgaccttcggcttaattttctgggcaaat 555
Query: 237 cgtcgactctttggggaaacggacagcgccgttgagtttctggctgcgaaaggatgaagg 296
|||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 554 cgtcgactcttttgggaaacggacagcgccgttgagttcctggctttgaaaggatgaaga 495
Query: 297 aaca 300
||||
Sbjct: 494 aaca 491
>gnl|LJGI|TC77966
Length = 1091
Score = 208 bits (105), Expect = 2e-53
Identities = 187/213 (87%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 190 gaccccgacgaccaccgtcgaccttcggctaaactttctgggcaaaccgtcgactctttg 249
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 465 gaccccgacgaccaccgtcgaccttcggctgaactttctgggcaaaccgtcaactctttg 524
Query: 250 gggaaacggacagcgccgttgagtttctggctgcgaaaggatgaaggaacaaccttcctt 309
| ||||| ||||||| ||||||||| ||||| ||||||||||||||||||| ||||||||
Sbjct: 525 gtgaaacagacagcgtcgttgagttcctggccgcgaaaggatgaaggaacacccttcctt 584
Query: 310 tgtgtctccggagacagtttctccatc-aaccccgtgagccgcaactttctctcgcgacc 368
||||||||||| || |||| ||| || | |||||| |||| | ||||||| |||||
Sbjct: 585 tgtgtctccggtgatagttcctctgtcgacccccgtcagccacgtctttctccggcgact 644
Query: 369 cttcgcagacaagtttctaaaacttaattttcg 401
|||||| ||||||||||| ||||| |||||||
Sbjct: 645 cttcgccgacaagtttcttaaactggattttcg 677
Score = 111 bits (56), Expect = 4e-24
Identities = 89/100 (89%)
Strand = Plus / Plus
Query: 5 ccacaagaaaacccatgttccggatcgtcgttccgtcgctgttgaccgccgccgctgccg 64
|||||| | ||||||| ||||||||| |||||||||||| || ||||||||||||| |||
Sbjct: 367 ccacaacagaacccatattccggatcatcgttccgtcgccgtcgaccgccgccgctaccg 426
Query: 65 ccttcgggagctctttctggtcaactccgacgaccgatga 104
|||||||||||| |||| ||||||||||| ||||| ||||
Sbjct: 427 ccttcgggagctttttccggtcaactccgtcgaccaatga 466
>gnl|LJGI|AV765738
Length = 197
Score = 204 bits (103), Expect = 3e-52
Identities = 148/163 (90%)
Strand = Plus / Minus
Query: 282 gcgaaaggatgaaggaacaaccttcctttgtgtctccggagacagtttctccatcaaccc 341
||||||||||||||||||| ||||||||||||| ||||| |||||||||||| |||||||
Sbjct: 193 gcgaaaggatgaaggaacacccttcctttgtgtttccggcgacagtttctccgtcaaccc 134
Query: 342 cgtgagccgcaactttctctcgcgacccttcgcagacaagtttctaaaacttaattttcg 401
|||||| |||||||| | | ||||| ||||| |||||||||||||||||| |||||||
Sbjct: 133 cgtgaggggcaactttttatggcgacttttcgccgacaagtttctaaaacttgattttcg 74
Query: 402 taagccttcaactcttgtatatgttttagcatcgagtaagcaa 444
||||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 73 taagccttcaactgttgtatatgttttagcctcgagtaagcaa 31
>gnl|LJGI|AV769500 similar to UniRef100_A7SBG6 Cluster: Predicted protein; n=1;
Nematostella vectensis|Rep: Predicted protein -
Nematostella vectensis (Starlet sea anemone), partial
(5%)
Length = 373
Score = 155 bits (78), Expect = 3e-37
Identities = 111/122 (90%)
Strand = Plus / Minus
Query: 282 gcgaaaggatgaaggaacaaccttcctttgtgtctccggagacagtttctccatcaaccc 341
||||||||||||||||||| ||||||||||||||||||| ||||||| |||| |||||||
Sbjct: 373 gcgaaaggatgaaggaacacccttcctttgtgtctccggcgacagttcctccgtcaaccc 314
Query: 342 cgtgagccgcaactttctctcgcgacccttcgcagacaagtttctaaaacttaattttcg 401
|||||||||||||||||||| ||||| |||||| |||||||||| |||||| |||| ||
Sbjct: 313 cgtgagccgcaactttctctggcgactcttcgccgacaagtttcagaaacttgatttccg 254
Query: 402 ta 403
||
Sbjct: 253 ta 252
>gnl|LJGI|TC79302
Length = 1713
Score = 115 bits (58), Expect = 2e-25
Identities = 152/182 (83%), Gaps = 1/182 (0%)
Strand = Plus / Plus
Query: 222 actttctgggcaaaccgtcgactctttggggaaacggacagcgccgttgagtttctggct 281
|||| |||||||||| ||| ||| |||||||||||||||| |||| ||||||| ||||
Sbjct: 803 acttcctgggcaaactgtcaactttttggggaaacggacaacgccattgagttcttggcc 862
Query: 282 gcgaaaggatgaaggaacaaccttcctttgtgtctccggagacagtttctccatcaa-cc 340
|||||||||||||| |||| | || |||||||||||| ||||||| || | |||| ||
Sbjct: 863 gcgaaaggatgaagaaacactatcccgttgtgtctccggcgacagttccttcgtcaatcc 922
Query: 341 ccgtgagccgcaactttctctcgcgacccttcgcagacaagtttctaaaacttaattttc 400
||| || || | |||||||| ||||||||| || ||||||||||| |||||| ||||||
Sbjct: 923 ccgcgaaccacgactttctcgggcgaccctttgccgacaagtttctgaaacttgattttc 982
Query: 401 gt 402
||
Sbjct: 983 gt 984
Score = 67.9 bits (34), Expect = 5e-11
Identities = 109/133 (81%), Gaps = 2/133 (1%)
Strand = Plus / Plus
Query: 6 cacaagaaaacccatgttccggatcgtcgttccgtcgctgttgaccgccgccgctgccgc 65
||||| ||||||| ||||||| |||| ||||||| ||| || |||||||||| |||||||
Sbjct: 594 cacaacaaaacccttgttccgaatcgccgttccgccgccgtcgaccgccgcccctgccgc 653
Query: 66 cttcgggagctctttctggtcaactccgacgaccgatg--aaaagacggaggatactgct 123
|||||| | |||| | ||||||||| ||||||||| |||| |||||| |||| |
Sbjct: 654 cttcggagccgttttccgatcaactccggcgaccgatggaaaaaaacggagtataccacg 713
Query: 124 acgatccttgccg 136
||||||||||||
Sbjct: 714 ccgatccttgccg 726