Miyakogusa Predicted Gene
- Lj0g3v0037019.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0037019.2 Non Chatacterized Hit- tr|A8B830|A8B830_GIAIC
Putative uncharacterized protein OS=Giardia
intestinal,23.57,1e-17,LMBR1,LMBR1-like membrane protein;
coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.1626.2
(1533 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58455 homologue to UniRef100_A7PP47 Cluster: Chromoso... 1362 0.0
gnl|LJGI|TC65421 homologue to UniRef100_A7PP47 Cluster: Chromoso... 718 0.0
gnl|LJGI|TC67790 homologue to UniRef100_A7PP47 Cluster: Chromoso... 593 e-168
gnl|LJGI|AW719681 homologue to UniRef100_A7PP47 Cluster: Chromos... 464 e-130
gnl|LJGI|TC70932 homologue to UniRef100_A7PP47 Cluster: Chromoso... 416 e-115
gnl|LJGI|CB828647 homologue to UniRef100_A7PP47 Cluster: Chromos... 82 1e-14
>gnl|LJGI|TC58455 homologue to UniRef100_A7PP47 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (48%)
Length = 862
Score = 1362 bits (687), Expect = 0.0
Identities = 718/727 (98%), Gaps = 1/727 (0%)
Strand = Plus / Plus
Query: 1 atgggcgatttcaatctcgccctggtgattgttgcgatcgtggtgtgcgtgatcgtgttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 atgggcgatttcaatctcgccctggtgattgttgcgatcgtggtgtgcgtgatcgtgttc 195
Query: 61 ctcttcaatgtctacctgctcgtgaactaccagcaccctgatgatgtgaaccaggcttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 ctcttcaatgtctacctgctcgtgaactaccagcaccctgatgatgtgaaccaggcttac 255
Query: 121 ttccccaaattcgtcgtcgttttgggactctccgtcgccgctatttccattctcatgctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ttccccaaattcgtcgtcgttttgggactctccgtcgccgctatttccattctcatgctt 315
Query: 181 ccggcggatgtcgctaaccggcaagcctgtcgccacgcgatttacaacggcgcgtgtaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ccggcggatgtcgctaaccggcaagcctgtcgccacgcgatttacaacggcgcgtgtaat 375
Query: 241 ctcacgctcccaatgaaggacctctggcttgccatctacattctcgacgcggttctcgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ctcacgctcccaatgaaggacctctggcttgccatctacattctcgacgcggttctcgtc 435
Query: 301 ttctttgtcatccccttcgccatgtttttctatgaaggagaccaggacaagagtgttggt 360
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 436 ttctttgtcatccccttcgccatgttcttctatgaaggagaccaggacaagagtgttggt 495
Query: 361 aagaggattaagagtgcgt-tgttgtggatggtgaccactgctatcgtgtgcgctcttgt 419
|||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||
Sbjct: 496 aagaggattaagagcgcgtctgttgtggatggtgaccactgctatcgtctgcgctcttgt 555
Query: 420 cctgggtactttgtacgggcttgttggtaaggtggattttaccgtaaggcatctctcttc 479
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 cctgggtactttatacgggcttgttggtaaggtggattttaccgtaaggcatctctcttc 615
Query: 480 ttccacaagctcatttcctagctcatggaacttcaataatggtcaacagtgtattggaag 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 ttccacaagctcatttcctagctcatggaacttcaataatggtcaacagtgtattggaag 675
Query: 540 tggcaccaagcagtgttctgcatactctgctagtccttcatcagagaaaacctggaccat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 tggcaccaagcagtgttctgcatactctgctagtccttcatcagagaaaacctggaccat 735
Query: 600 gagagctacctttccagaatatgttgttgctctcgcaactattgttggatctgttctttt 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 736 gagagctacctttccagaatatgttgttgctctcgcaactattgttggatctgtgctttt 795
Query: 660 ctctatatttggtggtgttggtatcgcttgtcttccaatgggacttatattttcatttat 719
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 796 tgctatatttggtggtgttggtatcgcttgtcttccattgggacttatattttcatttat 855
Query: 720 tcggcgt 726
|||||||
Sbjct: 856 tcggcgt 862
>gnl|LJGI|TC65421 homologue to UniRef100_A7PP47 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 765
Score = 718 bits (362), Expect = 0.0
Identities = 425/446 (95%)
Strand = Plus / Plus
Query: 1 atgggcgatttcaatctcgccctggtgattgttgcgatcgtggtgtgcgtgatcgtgttc 60
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 320 atgggcgatttcaatctcgcactggtgatcgttgcgatcgtggtgtgcgtgatcgtgttc 379
Query: 61 ctcttcaatgtctacctgctcgtgaactaccagcaccctgatgatgtgaaccaggcttac 120
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 380 ctcttcaatgtctacctgctcgtgaactatcagcacccagatgatgtgaaccaggcttac 439
Query: 121 ttccccaaattcgtcgtcgttttgggactctccgtcgccgctatttccattctcatgctt 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tttcccaaattcgtcgtcgttttgggactctccgtcgccgctatttccattctcatgctt 499
Query: 181 ccggcggatgtcgctaaccggcaagcctgtcgccacgcgatttacaacggcgcgtgtaat 240
|||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 500 ccggcggatgtcgctaaccgtcaggcctgtcgccacgcgatttacaacggcgcgtgtaac 559
Query: 241 ctcacgctcccaatgaaggacctctggcttgccatctacattctcgacgcggttctcgtc 300
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 560 ctcacgctcccaatgaaggacctctggcttgccatctacattcttgacgcggttctcgtc 619
Query: 301 ttctttgtcatccccttcgccatgtttttctatgaaggagaccaggacaagagtgttggt 360
||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 620 ttcttcgtcatcccctttgccatgttcttctatgaaggagaccaggataagagtgttggt 679
Query: 361 aagaggattaagagtgcgttgttgtggatggtgaccactgctatcgtgtgcgctcttgtc 420
|||||||||||||| || |||||||| ||||||||||||||||||| |||||||||||
Sbjct: 680 aagaggattaagagcgctctgttgtgggtggtgaccactgctatcgtctgcgctcttgtt 739
Query: 421 ctgggtactttgtacgggcttgttgg 446
||||||| ||| ||||||||||||||
Sbjct: 740 ctgggtattttatacgggcttgttgg 765
>gnl|LJGI|TC67790 homologue to UniRef100_A7PP47 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 716
Score = 593 bits (299), Expect = e-168
Identities = 353/371 (95%)
Strand = Plus / Plus
Query: 1163 accttctccttgcagtgattgctggtgccatgatgcttgggctgaaactagttttcatta 1222
||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 1 accttctccttgctgtgattgctggtgccatgatgcttgggctgagactagtcttcatta 60
Query: 1223 ctatacatcccatgaagtggggagggactctcatgaactcttttctgttcaatgtggggc 1282
|||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 61 ctatacatcccatgaagtggggtgggactctcatgaactcttttctgttcaacgtggggc 120
Query: 1283 ttatccttctttgttccattagtgtgatccagttctgctccacggcatttgcttactatg 1342
||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||
Sbjct: 121 ttatccttctttgttccattagtgtaatccagttctgctccacggcacttgcctactatg 180
Query: 1343 cccaagcaactgctgcacaggaaatttttggccacactttggagtcgctccgtggaatta 1402
| ||||||||||||||||||||||| ||||||||||| |||||||| || ||||||||||
Sbjct: 181 ctcaagcaactgctgcacaggaaatatttggccacaccttggagtctcttcgtggaatta 240
Query: 1403 aatatttgtacaagtacaatgtatttcagatcgcatttgttgttttggctggattgacgt 1462
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 241 aatatttgtacaagtacaacgtatttcagatcgcatttgttgttttggctggattgactt 300
Query: 1463 ttgtgtattatgctgcctttggatggagaagaaagaagcctagtggcaggttccagctgt 1522
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 301 ttgtatattatgctgcctttggatggagaagaaagaagcctagtggcaggttccaattgt 360
Query: 1523 ctacatgaggt 1533
|||||||||||
Sbjct: 361 ctacatgaggt 371
>gnl|LJGI|AW719681 homologue to UniRef100_A7PP47 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 408
Score = 464 bits (234), Expect = e-130
Identities = 234/234 (100%)
Strand = Plus / Plus
Query: 1 atgggcgatttcaatctcgccctggtgattgttgcgatcgtggtgtgcgtgatcgtgttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 atgggcgatttcaatctcgccctggtgattgttgcgatcgtggtgtgcgtgatcgtgttc 234
Query: 61 ctcttcaatgtctacctgctcgtgaactaccagcaccctgatgatgtgaaccaggcttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 ctcttcaatgtctacctgctcgtgaactaccagcaccctgatgatgtgaaccaggcttac 294
Query: 121 ttccccaaattcgtcgtcgttttgggactctccgtcgccgctatttccattctcatgctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ttccccaaattcgtcgtcgttttgggactctccgtcgccgctatttccattctcatgctt 354
Query: 181 ccggcggatgtcgctaaccggcaagcctgtcgccacgcgatttacaacggcgcg 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ccggcggatgtcgctaaccggcaagcctgtcgccacgcgatttacaacggcgcg 408
>gnl|LJGI|TC70932 homologue to UniRef100_A7PP47 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 614
Score = 416 bits (210), Expect = e-115
Identities = 210/210 (100%)
Strand = Plus / Plus
Query: 1324 acggcatttgcttactatgcccaagcaactgctgcacaggaaatttttggccacactttg 1383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acggcatttgcttactatgcccaagcaactgctgcacaggaaatttttggccacactttg 60
Query: 1384 gagtcgctccgtggaattaaatatttgtacaagtacaatgtatttcagatcgcatttgtt 1443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagtcgctccgtggaattaaatatttgtacaagtacaatgtatttcagatcgcatttgtt 120
Query: 1444 gttttggctggattgacgtttgtgtattatgctgcctttggatggagaagaaagaagcct 1503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttttggctggattgacgtttgtgtattatgctgcctttggatggagaagaaagaagcct 180
Query: 1504 agtggcaggttccagctgtctacatgaggt 1533
||||||||||||||||||||||||||||||
Sbjct: 181 agtggcaggttccagctgtctacatgaggt 210
>gnl|LJGI|CB828647 homologue to UniRef100_A7PP47 Cluster: Chromosome chr8 scaffold_23
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:,
partial (2%)
Length = 527
Score = 81.8 bits (41), Expect = 1e-14
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 1416 gtacaatgtatttcagatcgcatttgttgttttggctggattgac 1460
|||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtacaacgtatttcagatcgcatttgttgttttggctggattgac 525