Miyakogusa Predicted Gene

Lj0g3v0036869.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0036869.1 Non Chatacterized Hit- tr|D5A8Z1|D5A8Z1_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,56.52,2e-19,seg,NULL; EamA,Drug/metabolite
transporter,NODE_89017_length_778_cov_12.149100.path1.1
         (378 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76996 similar to UniRef100_A7NT04 Cluster: Chromosome...   652   0.0  

>gnl|LJGI|TC76996 similar to UniRef100_A7NT04 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (94%)
          Length = 837

 Score =  652 bits (329), Expect = 0.0
 Identities = 345/349 (98%), Gaps = 1/349 (0%)
 Strand = Plus / Plus

                                                                       
Query: 31  accccaaacccaaaagggtacgcgtgggcagtttccgccggattcaatgccgctcttgct 90
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 accccaaacccaaaagggtacgcgtgggcagtttccgccggattcaatgccgctcttgct 204

                                                                       
Query: 91  gccatttccgtcaagctccctcttcaccagtttgttaggtacgggcttgtgttactgttc 150
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gccatttccgtcaagctccctcttcaccagtttgttaggtacgggcttgtgttactgttc 264

                                                                       
Query: 151 aacgtcaccatgtggggttgttatgttaacagtctcaaagctctctcttctcttcaagca 210
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aacgtcaccatgtggggttgttatgttaacagtctcaaagctctctcttctcttcaagca 324

                                                                       
Query: 211 actgtcaccaatttcgctaccaatttcatttcttctggtttagctg-gtttcttcttctt 269
           ||||||||||||||||||||||||||||||||||||||| |||||| |||||||| || |
Sbjct: 325 actgtcaccaatttcgctaccaatttcatttcttctggtgtagctgagtttcttcgtcgt 384

                                                                       
Query: 270 tcgtgaaccactctctttccagtggtttgcaggtgccctactcataataattggtgtggt 329
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcgtgaaccactctctttccagtggtttgcaggtgccctactcataataattggtgtggt 444

                                                            
Query: 330 aatacttagcaactcaagcattaaaaagaaggttaacactgattaagtg 378
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aatacttagcaactcaagcattaaaaagaaggttaacactgattaagtg 493