Miyakogusa Predicted Gene
- Lj0g3v0036759.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0036759.1 Non Chatacterized Hit- tr|I3SDN8|I3SDN8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,SUBFAMILY
NOT NAMED,NULL; VACUOLAR SORTING PROTEIN VPS29,Phosphodiesterase
MJ0936; Metallo-dependent,CUFF.1999.1
(564 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75197 homologue to UniRef100_A7QEI2 Cluster: Chromoso... 1118 0.0
gnl|LJGI|AV764848 similar to UniRef100_A7QEI2 Cluster: Chromosom... 174 4e-43
gnl|LJGI|TC70443 similar to UniRef100_A7QEI2 Cluster: Chromosome... 168 2e-41
>gnl|LJGI|TC75197 homologue to UniRef100_A7QEI2 Cluster: Chromosome chr1 scaffold_84,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_84, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 1092
Score = 1118 bits (564), Expect = 0.0
Identities = 564/564 (100%)
Strand = Plus / Plus
Query: 1 atggttctggtcttggcactaggggatttgcacataccccacagggcacctgatcttcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 atggttctggtcttggcactaggggatttgcacataccccacagggcacctgatcttcct 313
Query: 61 gcaaagttcaaatccatgcttgtccctggcaagatccagcacatcatttgtactggaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gcaaagttcaaatccatgcttgtccctggcaagatccagcacatcatttgtactggaaat 373
Query: 121 ttatgtatcaaagaagtccatgactacttaaggactctttgcccagacttgcatataact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ttatgtatcaaagaagtccatgactacttaaggactctttgcccagacttgcatataact 433
Query: 181 cgtggtgagtatgatgaagagacaaaatatccggagactaagacactaaccattggccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 cgtggtgagtatgatgaagagacaaaatatccggagactaagacactaaccattggccaa 493
Query: 241 tttaagctgggactatgccatggtcatcaggttattccatggggtgacctcgactcactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tttaagctgggactatgccatggtcatcaggttattccatggggtgacctcgactcactg 553
Query: 301 gcaatgctacagaggcaacttggtgtagatatccttatcacaggtcacacccatcagttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gcaatgctacagaggcaacttggtgtagatatccttatcacaggtcacacccatcagttt 613
Query: 361 acagcatacaaacacgagggtggcgtggttataaatccaggctctgcaacaggtgcctac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 acagcatacaaacacgagggtggcgtggttataaatccaggctctgcaacaggtgcctac 673
Query: 421 agcagcatgacttatgatgtcaacccaagttttgttcttatggacattgatgccctccgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 agcagcatgacttatgatgtcaacccaagttttgttcttatggacattgatgccctccgt 733
Query: 481 gtcgtagtttatgtatatgaacttattgatggcgaggttaaggttgacaagattgatttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 gtcgtagtttatgtatatgaacttattgatggcgaggttaaggttgacaagattgatttc 793
Query: 541 aagaaaacatctacaagctagtct 564
||||||||||||||||||||||||
Sbjct: 794 aagaaaacatctacaagctagtct 817
>gnl|LJGI|AV764848 similar to UniRef100_A7QEI2 Cluster: Chromosome chr1 scaffold_84,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_84, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 343
Score = 174 bits (88), Expect = 4e-43
Identities = 91/92 (98%)
Strand = Plus / Minus
Query: 473 ccctccgtgtcgtagtttatgtatatgaacttattgatggcgaggttaaggttgacaaga 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ccctccgtgtcgtagtttatgtatatgaacttattgatggcgaggttaaggttgacaaga 284
Query: 533 ttgatttcaagaaaacatctacaagctagtct 564
|||||||||||| |||||||||||||||||||
Sbjct: 283 ttgatttcaagataacatctacaagctagtct 252
>gnl|LJGI|TC70443 similar to UniRef100_A7QEI2 Cluster: Chromosome chr1 scaffold_84,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_84, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (47%)
Length = 894
Score = 168 bits (85), Expect = 2e-41
Identities = 142/161 (88%)
Strand = Plus / Plus
Query: 270 ggttattccatggggtgacctcgactcactggcaatgctacagaggcaacttggtgtaga 329
||||||||| ||||| ||||| ||||||||||||||||||| |||||| |||| ||||||
Sbjct: 311 ggttattccgtggggagacctagactcactggcaatgctacggaggcagcttgatgtaga 370
Query: 330 tatccttatcacaggtcacacccatcagtttacagcatacaaacacgagggtggcgtggt 389
||||| | |||||||||||||||||||||||||| |||||||| | ||| ||| ||||
Sbjct: 371 catcctagttacaggtcacacccatcagtttacagcttacaaacatgtgggcggcatggt 430
Query: 390 tataaatccaggctctgcaacaggtgcctacagcagcatga 430
||||||||||| || ||||||||||| |||||||||||||
Sbjct: 431 gataaatccaggttccgcaacaggtgcttacagcagcatga 471
Score = 141 bits (71), Expect = 5e-33
Identities = 92/99 (92%)
Strand = Plus / Plus
Query: 460 atggacattgatgccctccgtgtcgtagtttatgtatatgaacttattgatggcgaggtt 519
||||||||||||| ||||| | |||| |||||||||||||||||||||||||| ||||||
Sbjct: 471 atggacattgatggcctccatctcgtggtttatgtatatgaacttattgatggagaggtt 530
Query: 520 aaggttgacaagattgatttcaagaaaacatctacaagc 558
|||||||| ||||||||||||||||||||||| ||||||
Sbjct: 531 aaggttgataagattgatttcaagaaaacatccacaagc 569