Miyakogusa Predicted Gene

Lj0g3v0036589.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0036589.1 Non Chatacterized Hit- tr|F6HVK5|F6HVK5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,81.94,3e-19,seg,NULL; PHOSPHORIBOSYLAMINOIMIDAZOLE CARBOXYLASE
ATPASE-SUBUNIT,NULL; no description,Pre-ATP-grasp,gene.g2573.t1.1
         (465 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68403 similar to UniRef100_Q8W197 Cluster: Aminoimida...   335   1e-91

>gnl|LJGI|TC68403 similar to UniRef100_Q8W197 Cluster: Aminoimidazole ribonucleotide
           carboxylase; n=1; Vigna unguiculata|Rep: Aminoimidazole
           ribonucleotide carboxylase - Vigna unguiculata (Cowpea),
           partial (29%)
          Length = 942

 Score =  335 bits (169), Expect = 1e-91
 Identities = 205/217 (94%)
 Strand = Plus / Plus

                                                                       
Query: 242 gcaatgatgaggtacctgttcatggactgtctgaagcggttgttggggttctgggaggag 301
           ||||||||||||| ||||||||||||||||||||  |  ||||||| |||||||||||||
Sbjct: 504 gcaatgatgaggtgcctgttcatggactgtctgagacaattgttggtgttctgggaggag 563

                                                                       
Query: 302 gtcaactgggtcgcatgctttgtcaagctgcttctaagatggcaattaaagttatggttt 361
           ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 564 gtcaactgggtcgcatgctttgtcaagctgcttctaaaatggcaattaaagtcatggttt 623

                                                                       
Query: 362 tggatccacaggagaactgcccagcgagttcgctttcttatcagcatagggttggaagct 421
           ||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 624 tggatccgcaggagaactgcccagcgagttcgctttcttatcatcatatggttggaagct 683

                                                
Query: 422 ttgatgacagtgctactgtggaggaattcgcaaagag 458
           |||||||||||||||| ||||||||||||||||||||
Sbjct: 684 ttgatgacagtgctacggtggaggaattcgcaaagag 720



 Score =  234 bits (118), Expect = 4e-61
 Identities = 189/215 (87%), Gaps = 12/215 (5%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcttcacagtgcgcgcacggtgttgtctgggcacaccagcacttcagcttttgcgttc 60
           ||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 302 atgcttcacagcgcgcgcacggtgttgtcagggcacaccagcacttcaccttttgcgttc 361

                                                                       
Query: 61  aaaccttgtcatccgtctacaaacaaagcctcttcttcactcggattctacatggaccaa 120
           ||||||            || || ||| ||||||||||||| |||||||||||||| |||
Sbjct: 362 aaacct------------accaagaaaacctcttcttcacttggattctacatggagcaa 409

                                                                       
Query: 121 ccacctcacctttcatcttctttgaagctgaagcagtgtcgccaccctcacctcactatt 180
           |||||||  ||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 410 ccacctcctctttcatcttctttgaagctgaagcagtgccgccacccccacctcactatt 469

                                              
Query: 181 caagcatcaaaccagcagggtgcagtttcctcaag 215
           ||||||||||||||||| |||||||| ||||||||
Sbjct: 470 caagcatcaaaccagcatggtgcagtctcctcaag 504