Miyakogusa Predicted Gene
- Lj0g3v0036229.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0036229.1 tr|Q7XC52|Q7XC52_ORYSJ Expressed protein OS=Oryza
sativa subsp. japonica GN=OSJNBb0089A17.6 PE=4
SV=,30.42,4e-18,seg,NULL; coiled-coil,NULL,gene.g2551.t1.1
(1519 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61374 similar to UniRef100_A7PKD1 Cluster: Chromosome... 1441 0.0
gnl|LJGI|TC73938 homologue to UniRef100_Q56YW7 Cluster: Glycopro... 230 2e-59
>gnl|LJGI|TC61374 similar to UniRef100_A7PKD1 Cluster: Chromosome chr15 scaffold_19,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_19, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 804
Score = 1441 bits (727), Expect = 0.0
Identities = 727/727 (100%)
Strand = Plus / Plus
Query: 1 atggcagattcaatctccagcaccaaacccccaaaatcaacttctgaacagaacaaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 atggcagattcaatctccagcaccaaacccccaaaatcaacttctgaacagaacaaagaa 137
Query: 61 gatccaaataagttctaccaccatttcctatacaaagccgccatagttctcattttcttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 gatccaaataagttctaccaccatttcctatacaaagccgccatagttctcattttcttc 197
Query: 121 gttattcttccactgttcccctcacaagctcctgagttcatcaaccaatctcttttcgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 gttattcttccactgttcccctcacaagctcctgagttcatcaaccaatctcttttcgcc 257
Query: 181 agaaactgggaattcctccaccttctcttcgtcggtatcgccatctcttacggcctcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 agaaactgggaattcctccaccttctcttcgtcggtatcgccatctcttacggcctcttc 317
Query: 241 agccgtcgcaacaacgaaactgagaaagagaacaactcaaaatttgatagtgcacaatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 agccgtcgcaacaacgaaactgagaaagagaacaactcaaaatttgatagtgcacaatca 377
Query: 301 cttgtttccaagttccttcaggtttcttcgtttttcgaggatgatgctgaaagtgaaaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 cttgtttccaagttccttcaggtttcttcgtttttcgaggatgatgctgaaagtgaaaac 437
Query: 361 ccctctgagtctgatgaaaccacaaaaatttatacttggagcaatcagcaccatagaaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ccctctgagtctgatgaaaccacaaaaatttatacttggagcaatcagcaccatagaaac 497
Query: 421 gaacctgtgattgttgtggccaaacagagaaatgaaaagcctttgcttttaccagttagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gaacctgtgattgttgtggccaaacagagaaatgaaaagcctttgcttttaccagttagg 557
Query: 481 agcttgaagtctcgtttagttgatgaccctgaagctgctgaatcatgcactgaacctttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 agcttgaagtctcgtttagttgatgaccctgaagctgctgaatcatgcactgaacctttc 617
Query: 541 tctgttagcagatcaaactctagaacagggtcgaaaagattttcaagcaatttgaacaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 tctgttagcagatcaaactctagaacagggtcgaaaagattttcaagcaatttgaacaga 677
Query: 601 gctagaaatgcagaagttgaaggtcctggtagtacaaaagtggaggataaggtgaaagag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gctagaaatgcagaagttgaaggtcctggtagtacaaaagtggaggataaggtgaaagag 737
Query: 661 aaggagaacgttgtgcttccttctccaattccatggagatcaaggtcaggaaaaatggaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 aaggagaacgttgtgcttccttctccaattccatggagatcaaggtcaggaaaaatggaa 797
Query: 721 cctaaac 727
|||||||
Sbjct: 798 cctaaac 804
>gnl|LJGI|TC73938 homologue to UniRef100_Q56YW7 Cluster: Glycoprotein homolog; n=2;
Arabidopsis thaliana|Rep: Glycoprotein homolog -
Arabidopsis thaliana (Mouse-ear cress), partial (53%)
Length = 681
Score = 230 bits (116), Expect = 2e-59
Identities = 122/124 (98%)
Strand = Plus / Plus
Query: 1278 catgggattcagaaatgacaaattcatggggcattcaagtgtccctcttgtgtcagagcc 1337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 catgggattcagaaatgacaaattcatggggcattcaagtgtccctcttgtgtcagagcc 182
Query: 1338 agcttcaatggaatttgcagaggaagggatcaatgaaagctttcttggcaagttaattga 1397
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 183 agcttcaatggaatttgcagaggaagggatccatgaaagcttttttggcaagttaattga 242
Query: 1398 ggaa 1401
||||
Sbjct: 243 ggaa 246