Miyakogusa Predicted Gene
- Lj0g3v0035779.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0035779.1 Non Chatacterized Hit- tr|D8QRP1|D8QRP1_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,28.85,2e-18,PPR_2,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; PPR_3,Pentatricopeptide repeat; PPR:
p,CUFF.1556.1
(1328 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79017 similar to UniRef100_A7PHB6 Cluster: Chromosome... 2163 0.0
gnl|LJGI|TC62303 weakly similar to UniRef100_A7PHB6 Cluster: Chr... 426 e-118
>gnl|LJGI|TC79017 similar to UniRef100_A7PHB6 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 1433
Score = 2163 bits (1091), Expect = 0.0
Identities = 1113/1119 (99%), Gaps = 1/1119 (0%)
Strand = Plus / Plus
Query: 1 atgaaccctcatcacaaacacctcgtcaaccaagcactcgtcgccgtcgtcaaagacctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 atgaaccctcatcacaaacacctcgtcaaccaagcactcgtcgccgtcgtcaaagacctc 374
Query: 61 ccattccacgccgcaccgtctcctccgtcatggaccaccgacgccgtcacggccgtcctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ccattccacgccgcaccgtctcctccgtcatggaccaccgacgccgtcacggccgtcctc 434
Query: 121 cgctccatcgccaggttctccttccaatcccaccgctccatgggccgccagaacggcttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 cgctccatcgccaggttctccttccaatcccaccgctccatgggccgccagaacggcttc 494
Query: 181 cgccaccgcacccccctccgccagcgcaacctcaacgacgaacaccgcaagctccacgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 cgccaccgcacccccctccgccagcgcaacctcaacgacgaacaccgcaagctccacgac 554
Query: 241 ggcctcctccttctcggcccggcggcctacagggacccccaccgcgtcgacctcgggctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ggcctcctccttctcggcccggcggcctacagggacccccaccgcgtcgacctcgggctc 614
Query: 301 cgtaaatccctcgagttcttccgctgggtcgaagcccactccggcttcacccacgacgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 cgtaaatccctcgagttcttccgctgggtcgaagcccactccggcttcacccacgacgag 674
Query: 361 gtcacgtgccgcgaaatggcctgcgtcctcgtccgcgccaacgccaccaaaaccctctgg 420
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 gtctcgtgccgcgaaatggcctgcgtcctcgtccgcgccaacgccaccaaaaccctctgg 734
Query: 421 ggttttctcaaagaaaccgccaacaaacaccacaacaaccaccgtaacaaccccatcacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 ggttttctcaaagaaaccgccaacaaacaccacaacaaccaccgtaacaaccccatcacc 794
Query: 481 accgcgaccatcacctgtttgataaaactcctaggtgaacaagggttggccagtgaagcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 accgcgaccatcacctgtttgataaaactcctaggtgaacaagggttggccagtgaagcc 854
Query: 541 tcactcacattttacagaatgaaacagtatcattgcagacccgacattcgcgcttacaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 tcactcacattttacagaatgaaacagtatcattgcagacccgacattcgcgcttacaac 914
Query: 601 actttaatctacgcgctctgcagggttgggaatttcgcgagagcgaagtttttactagag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915 actttaatctacgcgctctgcagggttgggaatttcgcgagagcgaagtttttactagag 974
Query: 661 caaatggagcttcccgggttctggtgcccgccggatgcgtttacttacacgattttgatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975 caaatggagcttcccgggttctggtgcccgccggatgcgtttacttacacgattttgatt 1034
Query: 721 agttcttattgcaggcacggcattttaacaggctgccggaaggctacgcggaggaggctc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1035 agttcttattgcaggcacggcattttaacaggctgccggaaggctacgcggaggaggctc 1094
Query: 781 tatgaagccggccgcctcttccggctcatgctgttcaaaggctttgttcctgatgttgtt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1095 tatgaagccggccgcctcttccggctcatgctgttcaaaggctttgttcctgatgttgtt 1154
Query: 841 acttacaatgccttgattgatggctgctgcaagacg-tatcgtatccagagagctcttga 899
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1155 acttacatgcccttgattgatggctgctgcaagacgctatcgtatccagagagctcttga 1214
Query: 900 gttgtttgaggatatgaagaaaaaggggtgtgccccgaaccgggttacttatgattcttt 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1215 gttgtttgaggatatgaagaaaaaggggtgtgccccgaaccgggttacttatgattcttt 1274
Query: 960 gattaggtattatagtgctaccaatgagattgacagggctgttgaggttttaagggatat 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1275 gattaggtattatagtgctaccaatgagattgacagggctgttgaggttttaagggatat 1334
Query: 1020 gcagaggttgaatcatgggattcctagttctagttcttacacgccaatcattcacgcgct 1079
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1335 gcagaggttgaatcatgggattcctagttctagttcttacacgcccatcattcacgcgct 1394
Query: 1080 ttgtgaagctggaagggttgctgaggcttggagttttct 1118
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1395 ttgtgaagctggaagggttgctgaggcttggagttttct 1433
>gnl|LJGI|TC62303 weakly similar to UniRef100_A7PHB6 Cluster: Chromosome chr17
scaffold_16, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (16%)
Length = 769
Score = 426 bits (215), Expect = e-118
Identities = 215/215 (100%)
Strand = Plus / Plus
Query: 1114 tttcttgttgagttagttgatggcggcaatgtacctcgagaatatacttataggttggtt 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttcttgttgagttagttgatggcggcaatgtacctcgagaatatacttataggttggtt 60
Query: 1174 tgtgataagctttgcttggccggagaggatggcttgttgggcgatgaagtgcatgagagg 1233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtgataagctttgcttggccggagaggatggcttgttgggcgatgaagtgcatgagagg 120
Query: 1234 ataaagaatggcatgaggaagaggtacaagcaaacgatgatggttaaaccggttatgact 1293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ataaagaatggcatgaggaagaggtacaagcaaacgatgatggttaaaccggttatgact 180
Query: 1294 cgcaagggttatcctgagattgagccagtttgaat 1328
|||||||||||||||||||||||||||||||||||
Sbjct: 181 cgcaagggttatcctgagattgagccagtttgaat 215