Miyakogusa Predicted Gene
- Lj0g3v0034169.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0034169.1 tr|G7JGD6|G7JGD6_MEDTR Transcription factor
bHLH19 OS=Medicago truncatula GN=MTR_4g097940 PE=4
SV=1,57.58,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; CIRCADIAN PROTEIN
CLOCK/ARNT/BMAL/PAS,NULL; HLH,Helix-loop-helix,CUFF.1500.1
(1053 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|CB827992 850 0.0
gnl|LJGI|BP076661 361 6e-99
gnl|LJGI|DC599211 similar to UniRef100_A7R939 Cluster: Chromosom... 84 2e-15
>gnl|LJGI|CB827992
Length = 529
Score = 850 bits (429), Expect = 0.0
Identities = 429/429 (100%)
Strand = Plus / Plus
Query: 1 atgatgcagatttcatccaccaattacttgcctgaacttggaatggaggagccaacttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 atgatgcagatttcatccaccaattacttgcctgaacttggaatggaggagccaacttac 160
Query: 61 tttcatcaattcccaatggattcatcatatgcagaattccaagatcttgagtttgagtcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 tttcatcaattcccaatggattcatcatatgcagaattccaagatcttgagtttgagtcc 220
Query: 121 ttcaccgcttccccagatgagagctattcctctggcaataagcgcttcaattctgaaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 ttcaccgcttccccagatgagagctattcctctggcaataagcgcttcaattctgaaagt 280
Query: 181 cctgattactcttttgcccctgcaagaccaaccaagcagcccaagactgagactacttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 cctgattactcttttgcccctgcaagaccaaccaagcagcccaagactgagactacttgg 340
Query: 241 agtgcatatggcacagatttgatagcttccaaggcttcttcttcttcttcatcacccaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 agtgcatatggcacagatttgatagcttccaaggcttcttcttcttcttcatcacccaaa 400
Query: 301 atcatttcttttgagcactccaatgtatcttcagtaacttcttcgcaacctttccacaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 atcatttcttttgagcactccaatgtatcttcagtaacttcttcgcaacctttccacaac 460
Query: 361 atgggtgcagcaaacgtggtgaagcctaaaatggaatccgggtttggtgaaaacttggat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 atgggtgcagcaaacgtggtgaagcctaaaatggaatccgggtttggtgaaaacttggat 520
Query: 421 tttgcagct 429
|||||||||
Sbjct: 521 tttgcagct 529
>gnl|LJGI|BP076661
Length = 532
Score = 361 bits (182), Expect = 6e-99
Identities = 182/182 (100%)
Strand = Plus / Minus
Query: 872 tgtctgcaatacttgtggaattagaaaagcaccatctcacagttcaaagtaccagcattt 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 tgtctgcaatacttgtggaattagaaaagcaccatctcacagttcaaagtaccagcattt 473
Query: 932 tgccctttggaaataacactcttgacataaccattgttactcagatgaagaaagaataca 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 tgccctttggaaataacactcttgacataaccattgttactcagatgaagaaagaataca 413
Query: 992 atctcacaacaaaggagctcataaaaagcttaagtcaatctttgaagcagtgtgcatgaa 1051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 atctcacaacaaaggagctcataaaaagcttaagtcaatctttgaagcagtgtgcatgaa 353
Query: 1052 aa 1053
||
Sbjct: 352 aa 351
>gnl|LJGI|DC599211 similar to UniRef100_A7R939 Cluster: Chromosome undetermined
scaffold_3290, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_3290,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (16%)
Length = 524
Score = 83.8 bits (42), Expect = 2e-15
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 536 tagccgaaagaaaacgaagggagaaactcagccagagattcattgctctttccgctgtcc 595
|||| |||||||||||||||||||||||||||||||| ||| |||||||||| || |||
Sbjct: 451 tagcagaaagaaaacgaagggagaaactcagccagagtttcgttgctctttcggccatcc 510
Query: 596 ttccaggactcaag 609
|||| || ||||||
Sbjct: 511 ttcctggcctcaag 524