Miyakogusa Predicted Gene

Lj0g3v0033989.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0033989.1 Non Chatacterized Hit- tr|A3I1S6|A3I1S6_9BACT
Putative uncharacterized protein OS=Algoriphagus sp.
P,21.84,6.2,seg,NULL,CUFF.1731.1
         (315 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67759 similar to UniRef100_A7PCL2 Cluster: Chromosome...   113   7e-25

>gnl|LJGI|TC67759 similar to UniRef100_A7PCL2 Cluster: Chromosome chr17 scaffold_12,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_12, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (20%)
          Length = 738

 Score =  113 bits (57), Expect = 7e-25
 Identities = 57/57 (100%)
 Strand = Plus / Plus

                                                                    
Query: 254 aacccgcttgcttctcctgtcttggctcgagatccgggccaagaacagaagattccc 310
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 aacccgcttgcttctcctgtcttggctcgagatccgggccaagaacagaagattccc 232



 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 77  tttccaccgatttcattatgtttccgactc 106
           ||||||||||||||||| ||||||||||||
Sbjct: 38  tttccaccgatttcattctgtttccgactc 67