Miyakogusa Predicted Gene
- Lj0g3v0033289.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0033289.1 Non Chatacterized Hit- tr|I1KCQ7|I1KCQ7_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=3,90.52,0,ABC
TRANSPORTER,NULL; ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A
(ABCA),ABC transporter A, ABCA;
P,NODE_48537_length_362_cov_65.682320.path1.1
(348 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62362 similar to UniRef100_A7QI68 Cluster: Chromosome... 571 e-162
gnl|LJGI|TC63647 similar to UniRef100_A7QI68 Cluster: Chromosome... 252 1e-66
gnl|LJGI|TC80520 similar to UniRef100_A7QI68 Cluster: Chromosome... 80 1e-14
gnl|LJGI|TC72727 similar to UniRef100_A7QI68 Cluster: Chromosome... 78 4e-14
>gnl|LJGI|TC62362 similar to UniRef100_A7QI68 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 1112
Score = 571 bits (288), Expect = e-162
Identities = 333/348 (95%)
Strand = Plus / Plus
Query: 1 atgaagaggaggcttagtgttgcaatttcattaataggagatcctagagttgtttatatg 60
|||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 223 atgaagaggaggcttagtgtagcaatttcattaatcggagatcctagagttgtttatatg 282
Query: 61 gatgagcctagtactggattagaccctgcatcaagaaacagcttatggaatgttgttaaa 120
|||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 283 gatgagcccagtactggattagacccagcatcaagaaacagcttatggaatgttgttaag 342
Query: 121 cgcgcaaaacagaatcgtgcaatcattctcacaacacattccatggaagaggcagaagtc 180
|| || ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 cgtgctaaacaaaatcgcgcaatcattctcacaacacattccatggaagaggcagaagtc 402
Query: 181 ctatgtgatcgtttaggaatatttgtagatggtagcttgcagtgcataggaaatccaaac 240
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ctatgtgatcggttgggaatatttgtagatggtagcttgcagtgcataggaaatccaaag 462
Query: 241 gagctgaaaggcagatatggaggaacctatgtgttcacgatgacaacatctgtggatcat 300
|||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 463 gagctgaaaggcaggtatggaggaacttatgtgttcacgatgacaacatctgtgaatcat 522
Query: 301 gaaaaggatgttgagaacttggtgcagaagctttccccaaatgctaac 348
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 gaaaaggatgttgagaacttggtgcagaagctttccccaaatgctaac 570
>gnl|LJGI|TC63647 similar to UniRef100_A7QI68 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 1143
Score = 252 bits (127), Expect = 1e-66
Identities = 211/239 (88%)
Strand = Plus / Plus
Query: 1 atgaagaggaggcttagtgttgcaatttcattaataggagatcctagagttgtttatatg 60
|||||||||||||||| ||| ||||||||||| || || ||||| |||||||||||||||
Sbjct: 149 atgaagaggaggcttattgtcgcaatttcattgattggggatcccagagttgtttatatg 208
Query: 61 gatgagcctagtactggattagaccctgcatcaagaaacagcttatggaatgttgttaaa 120
|||||||| ||||| || ||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 209 gatgagccaagtaccgggttagaccctgcttcaaggaaaagcttatggaatgttgttaag 268
Query: 121 cgcgcaaaacagaatcgtgcaatcattctcacaacacattccatggaagaggcagaagtc 180
| ||||||| | | ||||||||||| || || ||||||||||||||||||||||||| |
Sbjct: 269 cttgcaaaacgggaccgtgcaatcatcctgaccacacattccatggaagaggcagaagcc 328
Query: 181 ctatgtgatcgtttaggaatatttgtagatggtagcttgcagtgcataggaaatccaaa 239
|||||||||| |||||||| |||||| ||||||||||||||||| |||||||| ||||
Sbjct: 329 ttatgtgatcgattaggaatttttgtaaatggtagcttgcagtgcgtaggaaatgcaaa 387
Score = 77.8 bits (39), Expect = 4e-14
Identities = 87/103 (84%)
Strand = Plus / Plus
Query: 242 agctgaaaggcagatatggaggaacctatgtgttcacgatgacaacatctgtggatcatg 301
|||||||||||||||| |||||||| ||||| |||||||||||||||||| ||||| |
Sbjct: 633 agctgaaaggcagatacggaggaacttatgtcttcacgatgacaacatcttccgatcacg 692
Query: 302 aaaaggatgttgagaacttggtgcagaagctttccccaaatgc 344
| | ||| || |||||| ||||| |||||| ||||||||||
Sbjct: 693 agagggaagtggagaacctggtgatgaagctcaccccaaatgc 735
>gnl|LJGI|TC80520 similar to UniRef100_A7QI68 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 581
Score = 79.8 bits (40), Expect = 1e-14
Identities = 87/103 (84%)
Strand = Plus / Plus
Query: 242 agctgaaaggcagatatggaggaacctatgtgttcacgatgacaacatctgtggatcatg 301
||||||||| |||||| |||||||| |||||||||||||||||||||||| |||||||
Sbjct: 36 agctgaaagncagatacggaggaacttatgtgttcacgatgacaacatcttcagatcatg 95
Query: 302 aaaaggatgttgagaacttggtgcagaagctttccccaaatgc 344
| | ||| || |||| | ||||| |||||| ||||||||||
Sbjct: 96 agagggaagtggagagcctggtgatgaagctcaccccaaatgc 138
>gnl|LJGI|TC72727 similar to UniRef100_A7QI68 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 554
Score = 77.8 bits (39), Expect = 4e-14
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 310 gttgagaacttggtgcagaagctttccccaaatgctaac 348
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttgagaacttggtgcagaagctttccccaaatgctaac 39