Miyakogusa Predicted Gene
- Lj0g3v0033019.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0033019.2 Non Chatacterized Hit- tr|I1MNT9|I1MNT9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,75.08,0,no
description,Armadillo-like helical; SUBFAMILY NOT NAMED,NULL;
GEMIN2,Survival motor neuron intera,CUFF.1455.2
(1797 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59882 similar to UniRef100_A7PW59 Cluster: Chromosome... 355 6e-97
gnl|LJGI|TC77426 similar to UniRef100_A7PW59 Cluster: Chromosome... 72 1e-11
>gnl|LJGI|TC59882 similar to UniRef100_A7PW59 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 748
Score = 355 bits (179), Expect = 6e-97
Identities = 509/620 (82%), Gaps = 18/620 (2%)
Strand = Plus / Plus
Query: 43 aatcttgacaaagatgcagatagtcgcaaatctgcaatgagagcattgaagtcatatgtg 102
|||||||||||||||||||||||||||||||| || |||| ||| | ||||||||||||
Sbjct: 137 aatcttgacaaagatgcagatagtcgcaaatccgccatgaaagccctaaagtcatatgtg 196
Query: 103 aaagatttggactataagacaattcctatctttcttgcacaagtttctgagaccaaggaa 162
|||||| |||| | ||| | ||||| | ||||||||| || |||||||||| ||||||
Sbjct: 197 aaagatatggatttcaaggctgttcctgtgtttcttgcaaaaatttctgagacaaaggaa 256
Query: 163 accggtactttgtctggagaattcacaatttcactgtatgaagttcttgctcgggttcat 222
| || ||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 257 at----------tcc-----attcacaatttcactgtatgaagtttttgctagggttcat 301
Query: 223 ggtgtcaagattgttcccttgatagacagcattatgcaatccatagttcaaaccttagct 282
|||||||||||||||||||||||||||| ||| ||| |||||| ||||| ||| ||| |
Sbjct: 302 ggtgtcaagattgttcccttgatagacaccatcatgggatccattgttcagaccctaggt 361
Query: 283 tcaagcgcagggtctttccctcttcagcaggcttgctcaaaggtggttccagctgtagca 342
||||| | |||||||||| ||||||| ||||||||||| |||||||| ||||| |||||
Sbjct: 362 tcaagtggagggtctttctctcttcatcaggcttgctccaaggtggtaccagcaatagca 421
Query: 343 agatatggaattgaccccacaaccgcagatgagaagaagaggagcataattcattctatt 402
| |||||| ||||||| | ||||| |||| |||||||||||| ||||||| || ||| ||
Sbjct: 422 aaatatgggattgaccactcaaccccagaagagaagaagaggggcataatccactctctt 481
Query: 403 tgtaagcctctttctgattctctttcgagttctcaagagagtttgagttgtggcgctgca 462
|| ||||||||||||||||||||||| ||||| || ||||| | | || || || ||
Sbjct: 482 tgcaagcctctttctgattctctttcaagttcacaggagagcctaacttccggtgccgcg 541
Query: 463 ctatgcttgaaagctcttgtggattcagataactggcggtatgcttcagatgaaatagtc 522
|| |||||||| ||||| ||||| || ||||||||| ||| ||| || |||||||| |||
Sbjct: 542 ctttgcttgaaggctctggtggaatctgataactggaggtttgcgtcggatgaaatggtc 601
Query: 523 aacagggtttgccagaatgttgctgtggccttagaggaaaaat---ccactcagaccaat 579
|| ||||||||||||||||| |||||||| ||||||| ||||| | || || |||
Sbjct: 602 aatagggtttgccagaatgtggctgtggcattagagggaaaatgtaagagccaaacgaat 661
Query: 580 tctcatatgggtctggttatggcgttagccaagcgtaatgctttgattgttgaggcctat 639
| || ||||| |||||||||||| | || ||||| ||||||||||||||||| ||||||
Sbjct: 662 gcacacatgggcctggttatggcgctggcgaagcggaatgctttgattgttgaagcctat 721
Query: 640 gctagattgctcatacaatc 659
|| || ||| ||||||||||
Sbjct: 722 gcaaggttgttcatacaatc 741
>gnl|LJGI|TC77426 similar to UniRef100_A7PW59 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 714
Score = 71.9 bits (36), Expect = 1e-11
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 1742 ctcctttactctggatcaatagtcaggaagaaggccactttcttgtcccgacataa 1797
|||||||| |||||||||||| |||||| |||||||||| ||||||||| ||||||
Sbjct: 448 ctcctttaatctggatcaataatcaggatgaaggccactatcttgtcccaacataa 503
Score = 65.9 bits (33), Expect = 8e-10
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 1319 gtcccctaagatcacgctcccaggttaatgttgacaccattaaaatctttacaaccccaa 1378
|||||| ||| |||||| | ||| ||| |||||||| |||| |||| || || |||||||
Sbjct: 1 gtccccaaaggtcacgcacacagattagtgttgacaacattgaaatattcactaccccaa 60
Query: 1379 ggaagctgatccactctcttcaaga 1403
||||||| || ||||||||||||||
Sbjct: 61 ggaagctcattcactctcttcaaga 85
Score = 58.0 bits (29), Expect = 2e-07
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 1551 gaatgaaagctcatgtggtgatgtgcagttccaaggtggaccggagtcggtctcatcaac 1610
||||||||||| ||||| ||||||| ||||||||||| | | ||||| || ||||||||
Sbjct: 227 gaatgaaagcttatgtgctgatgtggagttccaaggtagctcagagtcagtgtcatcaac 286
Query: 1611 agatgaacttcttggtgatgctgat 1635
| |||| |||| || |||||||||
Sbjct: 287 aaatgaccttccaggagatgctgat 311