Miyakogusa Predicted Gene
- Lj0g3v0032719.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0032719.1 Non Chatacterized Hit- tr|J3M3H4|J3M3H4_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB05G1,40.16,0.000000000000001, ,CUFF.1477.1
(795 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76595 similar to UniRef100_Q8HMJ4 Cluster: NADH-ubiqu... 781 0.0
gnl|LJGI|DC597666 weakly similar to UniRef100_Q9FFY0 Cluster: Ge... 147 1e-34
>gnl|LJGI|TC76595 similar to UniRef100_Q8HMJ4 Cluster: NADH-ubiquinone oxidoreductase
chain 2; n=1; Carapus bermudensis|Rep: NADH-ubiquinone
oxidoreductase chain 2 - Carapus bermudensis, partial
(6%)
Length = 591
Score = 781 bits (394), Expect = 0.0
Identities = 418/425 (98%), Gaps = 1/425 (0%)
Strand = Plus / Plus
Query: 1 atggctgctgatcagaggaggaaacgaataaatggtgcaagcattgttggttatggttct 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 167 atggctgctgatcagaggaggaaacgaataaatggtgcaagcattgttggttatggatct 226
Query: 61 agagagcatcacaggaccaaaagaaagaattcgggacaaggtcaaaatgatttaaacctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 agagagcatcacaggaccaaaagaaagaattcgggacaaggtcaaaatgatttaaacctg 286
Query: 121 agatctcacatctctgttgagtgggatagtaatcag-aaaagggttgtggccaagcggga 179
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 287 agatctcacatctctgttgagtgggatagtaatcagtaaaagggttgtggccaagcggga 346
Query: 180 acagattggcatcagtcggagacaaatgaaaccatttgtcaattttgtttctaatgatca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 acagattggcatcagtcggagacaaatgaaaccatttgtcaattttgtttctaatgatca 406
Query: 240 taaagtcttggcagatgtgtttacaatgcctcaagaaattttttccttggataatttaag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 taaagtcttggcagatgtgtttacaatgcctcaagaaattttttccttggataatttaag 466
Query: 300 tgaagtgctttcatatgaggtttggaagacccttctttcagaaaatgaacgaaaccttct 359
|||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 467 tgaagtgctttcatatgaggtttggaagacccttctttncagaaatgaacgagaccttct 526
Query: 360 tatgcagtttctccctagtggcttagagccacatcacgctgtggaagaattgctctctgg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 tatgcagtttctccctagtggcttagagccacatcacgctgtggaagaattgctctctgg 586
Query: 420 gagta 424
|||||
Sbjct: 587 gagta 591
>gnl|LJGI|DC597666 weakly similar to UniRef100_Q9FFY0 Cluster: Genomic DNA chromosome
5 P1 clone:MAC12; n=2; Arabidopsis thaliana|Rep:
Genomic DNA, partial (9%)
Length = 565
Score = 147 bits (74), Expect = 1e-34
Identities = 242/298 (81%)
Strand = Plus / Plus
Query: 362 tgcagtttctccctagtggcttagagccacatcacgctgtggaagaattgctctctggga 421
|||||||||| || |||| |||| |||||||||| | ||| |||||| || || |||
Sbjct: 1 tgcagtttcttcccagtgacttaaagccacatcaagttgtcagagaattactttcagggg 60
Query: 422 gtaactttcagtttggaaatcccttattgaaatggggagcatcactttgtttaggtgatc 481
||||||||| |||||||| || || | |||||||| | | |||||||| |||| ||
Sbjct: 61 ataactttcactttggaaacccttttgtaaaatggggttctttactttgttcaggttctc 120
Query: 482 tccatccagatatgattgttgatcgggaactgcatctgaaggctgaaaacagagcatatt 541
| |||||||||||||||||| | | ||| | |||||| || |||| || |||||||| |
Sbjct: 121 ttcatccagatatgattgttaaccaggagcagcatctaaaatctgataaaagagcatact 180
Query: 542 actcgcaattatataattatcacaatgatatgctaggatttctatctaagttgaaggaga 601
|||| || || ||||||||||||| |||||| ||||||||||| |||||||||| ||
Sbjct: 181 actcacagatacataattatcacaaggatatggtaggatttctagttaagttgaagagga 240
Query: 602 ggtggaaaagctgcaaagatccagaaaaggaattttttcagaagatacggagatcaaa 659
||||| |||||||||||||||||||||||||| || | |||| ||| ||||| |||||
Sbjct: 241 ggtgggaaagctgcaaagatccagaaaaggaaattctgcagatgattcggaggtcaaa 298