Miyakogusa Predicted Gene
- Lj0g3v0032179.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0032179.1 tr|Q2MCJ4|Q2MCJ4_POPCN Xylan 1,4-beta-xylosidase
OS=Populus canescens GN=BXL7 PE=2
SV=1,79.17,0.11,Glyco_hydro_3_C,Glycoside hydrolase family 3
C-terminal domain; no description,Glycoside hydrolase
f,NODE_44947_length_1098_cov_53.120220.path1.1
(696 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64985 weakly similar to UniRef100_Q2MCJ4 Cluster: Xyl... 844 0.0
gnl|LJGI|TC75500 weakly similar to UniRef100_Q2MCJ4 Cluster: Xyl... 287 5e-77
>gnl|LJGI|TC64985 weakly similar to UniRef100_Q2MCJ4 Cluster: Xylan
1,4-beta-xylosidase; n=1; Populus tremula x Populus
alba|Rep: Xylan 1,4-beta-xylosidase - Populus tremula x
Populus alba, partial (26%)
Length = 777
Score = 844 bits (426), Expect = 0.0
Identities = 426/426 (100%)
Strand = Plus / Plus
Query: 271 ccaattacttggtacccaaaagacttcatcagagtaccaatgacagacatgaggatgaga 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ccaattacttggtacccaaaagacttcatcagagtaccaatgacagacatgaggatgaga 61
Query: 331 gctgatccagcatcaggctaccccggaagaacctaccgattttacacaggtccaaaggtc 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gctgatccagcatcaggctaccccggaagaacctaccgattttacacaggtccaaaggtc 121
Query: 391 tatgaatttggctatggtctaagttactcaaaatactcctacgagttcgtatccgtcaca 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tatgaatttggctatggtctaagttactcaaaatactcctacgagttcgtatccgtcaca 181
Query: 451 caaaacaaccttcacatcaaccagtcatccactcatttaacggttgatgaaaactccgaa 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 caaaacaaccttcacatcaaccagtcatccactcatttaacggttgatgaaaactccgaa 241
Query: 511 accatccgttacaagctggtttcggagctcggtgaagagacttgtcaaagcatgtctgtc 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 accatccgttacaagctggtttcggagctcggtgaagagacttgtcaaagcatgtctgtc 301
Query: 571 tcggtgactttgggagttaaaaatgatggaagcatggcggggaagcatccagtgttgctg 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tcggtgactttgggagttaaaaatgatggaagcatggcggggaagcatccagtgttgctg 361
Query: 631 tttatgaggcaggggaaacagagaaatggaaaccctttaaaacagttggtaggttttcaa 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tttatgaggcaggggaaacagagaaatggaaaccctttaaaacagttggtaggttttcaa 421
Query: 691 agtgtg 696
||||||
Sbjct: 422 agtgtg 427
>gnl|LJGI|TC75500 weakly similar to UniRef100_Q2MCJ4 Cluster: Xylan
1,4-beta-xylosidase; n=1; Populus tremula x Populus
alba|Rep: Xylan 1,4-beta-xylosidase - Populus tremula x
Populus alba, partial (30%)
Length = 1066
Score = 287 bits (145), Expect = 5e-77
Identities = 417/507 (82%), Gaps = 3/507 (0%)
Strand = Plus / Plus
Query: 190 tgggctggttatcctggtgaacttggaggagtggcactggcccaggttatctttggagac 249
|||||||||||||| || ||||||||||| | ||||| || |||||||| ||||| |||
Sbjct: 20 tgggctggttatccaggagaacttggaggcattgcacttgcacaggttatatttggtgac 79
Query: 250 cataacccaggaggaagactaccaattacttggtacccaaaagacttcatcagagtacca 309
|||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||| |||
Sbjct: 80 cataacccaggaggaagattaccaattacttggtacccaaaagactacatcaaagtgcca 139
Query: 310 atgacagacatgaggatgagagctgatccagcatcaggctaccccggaagaacctaccga 369
|||||||||||||||||| |||||||||| ||| | ||||| ||||| ||||| ||||||
Sbjct: 140 atgacagacatgaggatgcgagctgatcctgcaaccggctatcccggtagaacttaccga 199
Query: 370 ttttacacaggtccaaaggtctatgaatttggctatggtctaagttactcaaaatactcc 429
|| |||| |||||||| | |||||||||||||| || ||||| ||||||||||| |||
Sbjct: 200 ttctacaagggtccaaaattgtatgaatttggctacggactaagctactcaaaatattcc 259
Query: 430 tacgagttcgtatccgtcacacaaaacaaccttcacatcaaccagtcatccactcattta 489
|| |||||| | || || ||||| ||||| |||||| |||| || ||||||||||||
Sbjct: 260 tatgagttcatttctgttacacacaacaatcttcacttcaatcaatcatccactcat--- 316
Query: 490 acggttgatgaaaactccgaaaccatccgttacaagctggtttcggagctcggtgaagag 549
| | | |||||| || ||||||| | ||||| | ||||| || | ||||||||
Sbjct: 317 atgatacttgaaaattctgaaaccaccaagtacaaattagtttctgaattgggtgaagaa 376
Query: 550 acttgtcaaagcatgtctgtctcggtgactttgggagttaaaaatgatggaagcatggcg 609
| || |||| ||||| |||||||| || |||||||| ||||| |||||||||||| |
Sbjct: 377 gcctgcgaaagaatgtcggtctcggtcaccgtgggagttcaaaatcatggaagcatggtg 436
Query: 610 gggaagcatccagtgttgctgtttatgaggcaggggaaacagagaaatggaaacccttta 669
||||||||||| |||||||| || ||||||| || |||||||||| |||| | |
Sbjct: 437 gggaagcatcctgtgttgcttttcatgaggccaggaaaacagagaacaggaagttttatc 496
Query: 670 aaacagttggtaggttttcaaagtgtg 696
||||||||||| |||||||| ||||||
Sbjct: 497 aaacagttggtgggttttcagagtgtg 523