Miyakogusa Predicted Gene
- Lj0g3v0031929.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0031929.1 Non Chatacterized Hit- tr|I3SQZ8|I3SQZ8_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2 SV,59.74,0,FAMILY
NOT NAMED,NULL; AP2_ERF,AP2/ERF domain; no description,AP2/ERF domain;
AP2,AP2/ERF domain; DN,CUFF.1845.1
(877 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69337 similar to UniRef100_Q32W74 Cluster: Ethylene r... 1427 0.0
gnl|LJGI|TC73703 weakly similar to UniRef100_A7QY41 Cluster: Chr... 315 3e-85
gnl|LJGI|TC77803 similar to UniRef100_A7QY41 Cluster: Chromosome... 109 3e-23
gnl|LJGI|TC67337 similar to UniRef100_Q5YLQ7 Cluster: Ethylene-r... 107 1e-22
gnl|LJGI|TC64756 similar to UniRef100_Q9FR33 Cluster: Ripening r... 68 1e-10
gnl|LJGI|TC57892 similar to UniRef100_Q6Q4I4 Cluster: Ethylene r... 68 1e-10
gnl|LJGI|TC76248 similar to UniRef100_Q32W74 Cluster: Ethylene r... 54 2e-06
>gnl|LJGI|TC69337 similar to UniRef100_Q32W74 Cluster: Ethylene responsive element
binding protein C2; n=1; Capsicum annuum|Rep: Ethylene
responsive element binding protein C2 - Capsicum annuum
(Bell pepper), partial (36%)
Length = 1154
Score = 1427 bits (720), Expect = 0.0
Identities = 720/720 (100%)
Strand = Plus / Plus
Query: 158 ctagccccactcaatcttcttcctctgattcctcttcctcttcttccaacatctctctag 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ctagccccactcaatcttcttcctctgattcctcttcctcttcttccaacatctctctag 364
Query: 218 atcattactttgatacacaaaatcaacttcccctgtttgaatttgagttcaaaccacacc 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 atcattactttgatacacaaaatcaacttcccctgtttgaatttgagttcaaaccacacc 424
Query: 278 cgattgacctacaaacaccggttgctccgccgcaacgactcgcacggaagccctcgctgc 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 cgattgacctacaaacaccggttgctccgccgcaacgactcgcacggaagccctcgctgc 484
Query: 338 aaatcgctctacctaagaaaaccaccgagtggatccagttcggaaacccggatccgaatc 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 aaatcgctctacctaagaaaaccaccgagtggatccagttcggaaacccggatccgaatc 544
Query: 398 cggacccggtcgtgcaggcccaacctgagcccgcggagaagaaacagcactacagaggtg 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 cggacccggtcgtgcaggcccaacctgagcccgcggagaagaaacagcactacagaggtg 604
Query: 458 tccgccagaggccgtgggggaagttcgccgctgagattcgcgacccgaacaagcgtggtt 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tccgccagaggccgtgggggaagttcgccgctgagattcgcgacccgaacaagcgtggtt 664
Query: 518 cgagggtgtggctcgggactttcgacaccgccatcgaagctgctaaggcttatgaccggg 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 cgagggtgtggctcgggactttcgacaccgccatcgaagctgctaaggcttatgaccggg 724
Query: 578 ctgcgttcaagcttcgcgggtcgaaagccatactgaactttcctcttgatgtcgccgccg 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 ctgcgttcaagcttcgcgggtcgaaagccatactgaactttcctcttgatgtcgccgccg 784
Query: 638 ccgctgcctccggcgacggagagagtgacaggaaacgccgccgtgaagaggaggtggtgg 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 ccgctgcctccggcgacggagagagtgacaggaaacgccgccgtgaagaggaggtggtgg 844
Query: 698 aagttaaggcggtggtgaaaagggagaaaaccacggaatcggaagttaaggagacgccgt 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 aagttaaggcggtggtgaaaagggagaaaaccacggaatcggaagttaaggagacgccgt 904
Query: 758 tgacgccgtctatttggaccggggtatgggacagtgatgtgaaggggattttcacggtgc 817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 tgacgccgtctatttggaccggggtatgggacagtgatgtgaaggggattttcacggtgc 964
Query: 818 cgccgttgtcgccgttatctccccttccggcttttcattcacagttaatgatggtgtgaa 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965 cgccgttgtcgccgttatctccccttccggcttttcattcacagttaatgatggtgtgaa 1024
Score = 143 bits (72), Expect = 2e-33
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 1 atggcttatgctgatgaaatttcagctctcaaacaaatcaaattgcatctcctaggtgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 atggcttatgctgatgaaatttcagctctcaaacaaatcaaattgcatctcctaggtgaa 207
Query: 61 ctctctccactc 72
||||||||||||
Sbjct: 208 ctctctccactc 219
>gnl|LJGI|TC73703 weakly similar to UniRef100_A7QY41 Cluster: Chromosome undetermined
scaffold_237, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_237,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (7%)
Length = 481
Score = 315 bits (159), Expect = 3e-85
Identities = 162/163 (99%)
Strand = Plus / Plus
Query: 158 ctagccccactcaatcttcttcctctgattcctcttcctcttcttccaacatctctctag 217
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ctagccccactcaaccttcttcctctgattcctcttcctcttcttccaacatctctctag 378
Query: 218 atcattactttgatacacaaaatcaacttcccctgtttgaatttgagttcaaaccacacc 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 atcattactttgatacacaaaatcaacttcccctgtttgaatttgagttcaaaccacacc 438
Query: 278 cgattgacctacaaacaccggttgctccgccgcaacgactcgc 320
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cgattgacctacaaacaccggttgctccgccgcaacgactcgc 481
Score = 143 bits (72), Expect = 2e-33
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 1 atggcttatgctgatgaaatttcagctctcaaacaaatcaaattgcatctcctaggtgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 atggcttatgctgatgaaatttcagctctcaaacaaatcaaattgcatctcctaggtgaa 221
Query: 61 ctctctccactc 72
||||||||||||
Sbjct: 222 ctctctccactc 233
>gnl|LJGI|TC77803 similar to UniRef100_A7QY41 Cluster: Chromosome undetermined
scaffold_237, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_237,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (33%)
Length = 1139
Score = 109 bits (55), Expect = 3e-23
Identities = 100/115 (86%)
Strand = Plus / Plus
Query: 443 agcactacagaggtgtccgccagaggccgtgggggaagttcgccgctgagattcgcgacc 502
||||||||||||| ||||| || || |||||||| ||||||||||| ||||| || ||||
Sbjct: 513 agcactacagaggagtccgtcaaagaccgtggggcaagttcgccgccgagatccgggacc 572
Query: 503 cgaacaagcgtggttcgagggtgtggctcgggactttcgacaccgccatcgaagc 557
|||||||||| || || || || |||||||| || ||||||||||||||||||||
Sbjct: 573 cgaacaagcgcggatctagagtttggctcggaacattcgacaccgccatcgaagc 627
Score = 54.0 bits (27), Expect = 2e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 807 tttcacggtgccgccgttgtcgccgttatctcccc 841
|||||||||| |||| |||||||||||||||||||
Sbjct: 922 tttcacggtggcgcctttgtcgccgttatctcccc 956
>gnl|LJGI|TC67337 similar to UniRef100_Q5YLQ7 Cluster: Ethylene-responsive element
binding factor; n=1; Gossypium hirsutum|Rep:
Ethylene-responsive element binding factor - Gossypium
hirsutum (Upland cotton) (Gossypium mexicanum), partial
(36%)
Length = 1485
Score = 107 bits (54), Expect = 1e-22
Identities = 99/114 (86%)
Strand = Plus / Plus
Query: 444 gcactacagaggtgtccgccagaggccgtgggggaagttcgccgctgagattcgcgaccc 503
|||||||||||| |||||||| || |||||||| ||||||| ||| ||||| || |||||
Sbjct: 165 gcactacagaggagtccgccaaagaccgtggggcaagttcgtcgccgagatccgggaccc 224
Query: 504 gaacaagcgtggttcgagggtgtggctcgggactttcgacaccgccatcgaagc 557
||||||||| || || ||| | |||||||| || ||||||||||||||||||||
Sbjct: 225 gaacaagcgcggatctaggctttggctcggaacattcgacaccgccatcgaagc 278
>gnl|LJGI|TC64756 similar to UniRef100_Q9FR33 Cluster: Ripening regulated protein
DDTFR10/A; n=1; Solanum lycopersicum|Rep: Ripening
regulated protein DDTFR10/A - Solanum lycopersicum
(Tomato) (Lycopersicon esculentum), partial (38%)
Length = 767
Score = 67.9 bits (34), Expect = 1e-10
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 520 agggtgtggctcgggactttcgacaccgccatcgaagctgctaaggcttatgac 573
||||||||||| |||||||| ||||| ||||| ||||||||||| |||||||||
Sbjct: 577 agggtgtggcttgggacttttgacacagccattgaagctgctaaagcttatgac 630
>gnl|LJGI|TC57892 similar to UniRef100_Q6Q4I4 Cluster: Ethylene response factor 5;
n=1; Solanum lycopersicum|Rep: Ethylene response factor
5 - Solanum lycopersicum (Tomato) (Lycopersicon
esculentum), partial (38%)
Length = 1238
Score = 67.9 bits (34), Expect = 1e-10
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 520 agggtgtggctcgggactttcgacaccgccatcgaagctgctaaggcttatgac 573
||||||||||| |||||||| ||||| ||||| ||||||||||| |||||||||
Sbjct: 483 agggtgtggcttgggacttttgacacagccattgaagctgctaaagcttatgac 536
>gnl|LJGI|TC76248 similar to UniRef100_Q32W74 Cluster: Ethylene responsive element
binding protein C2; n=1; Capsicum annuum|Rep: Ethylene
responsive element binding protein C2 - Capsicum annuum
(Bell pepper), partial (20%)
Length = 539
Score = 54.0 bits (27), Expect = 2e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 807 tttcacggtgccgccgttgtcgccgttatctcccc 841
|||||||||| |||| |||||||||||||||||||
Sbjct: 288 tttcacggtggcgcctttgtcgccgttatctcccc 322