Miyakogusa Predicted Gene
- Lj0g3v0026789.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0026789.1 Non Chatacterized Hit- tr|I3SWC8|I3SWC8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,60.62,0,no
description,NULL; seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; LRAT,LRAT-like
domai,NODE_53624_length_845_cov_37.029587.path1.1
(723 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW598115 similar to UniRef100_A7PTM4 Cluster: Chromosom... 100 2e-20
gnl|LJGI|TC58706 similar to UniRef100_A7PTM4 Cluster: Chromosome... 100 2e-20
>gnl|LJGI|BW598115 similar to UniRef100_A7PTM4 Cluster: Chromosome undetermined
scaffold_30, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome undetermined scaffold_30, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (43%)
Length = 509
Score = 99.6 bits (50), Expect = 2e-20
Identities = 77/86 (89%)
Strand = Plus / Plus
Query: 43 cctggcgatcacatttactcttggaggcaggcttacctctatgcacatcatggaatatat 102
||||| |||||||||||||||||||| ||||||||| |||| |||||||| |||||||||
Sbjct: 150 cctggtgatcacatttactcttggagacaggcttacgtctacgcacatcacggaatatat 209
Query: 103 gttggtgagggaaaggtgatccactt 128
|| ||||| || | ||||||||||||
Sbjct: 210 gtcggtgatggcatggtgatccactt 235
Score = 54.0 bits (27), Expect = 1e-06
Identities = 87/107 (81%)
Strand = Plus / Plus
Query: 205 ccatgcccaacatgtggtgaacaaacaaggactgatggtgtcatctcttcatgcatggac 264
|||||||||| ||| ||||| ||| | | || |||||| || |||||||| || ||||
Sbjct: 324 ccatgcccaaaatgcggtgaccaatctaagagtgatggggtgatctcttcctgtttggat 383
Query: 265 tgttttcttaatggtggtgatctttatcgctttgagtatggtgtctc 311
||||||||| ||| ||| |||| || | ||||||||||||||||||
Sbjct: 384 tgttttcttgctgggggtaatctatacctctttgagtatggtgtctc 430
>gnl|LJGI|TC58706 similar to UniRef100_A7PTM4 Cluster: Chromosome undetermined
scaffold_30, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome undetermined scaffold_30, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (79%)
Length = 1126
Score = 99.6 bits (50), Expect = 2e-20
Identities = 77/86 (89%)
Strand = Plus / Plus
Query: 43 cctggcgatcacatttactcttggaggcaggcttacctctatgcacatcatggaatatat 102
||||| |||||||||||||||||||| ||||||||| |||| |||||||| |||||||||
Sbjct: 148 cctggtgatcacatttactcttggagacaggcttacatctacgcacatcacggaatatat 207
Query: 103 gttggtgagggaaaggtgatccactt 128
|| ||||| || | ||||||||||||
Sbjct: 208 gtcggtgatggcatggtgatccactt 233
Score = 97.6 bits (49), Expect = 9e-20
Identities = 97/113 (85%)
Strand = Plus / Plus
Query: 376 gaagaagtcctccaccgcgcccagtttcttcttgagaatggattcggtggctacgatgtc 435
||||| ||||| |||||||| |||||||||||| |||||||| ||||||||| | |
Sbjct: 493 gaagatgtccttcaccgcgcttcgtttcttcttgaaaatggatttggtggctacaacatt 552
Query: 436 ttcaagaagaactgtgaagactttgcaatttactgtaagacaggccttcttgt 488
|||| ||| |||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 553 ttcaggaataactgtgaagactttgcaatttactgcaagacaggtctgcttgt 605